RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ENTHD1Q8IYW4 607 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 PLPP5Q8NEB5 264 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 NSMAFQ92636 917 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 DNASE1L2Q92874 299 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 CDKN2AIPNLQ96HQ2 116 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 FUBP3Q96I24 572 aaKnown RBP eCLIP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ADAD1Q96M93 576 aaKnown RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 FEVQ99581 238 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 TAPBPLQ9BX59 468 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 CIPCQ9C0C6 399 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 LRFN1Q9P244 771 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ANKRD26Q9UPS8 1709 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 MRC1P22897 1456 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 H3BRB1 525 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 UBFD1O14562 309 aaKnown RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ONECUT3O60422 494 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 TOXO94900 526 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SPDEFO95238 335 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SLC35E2BP0CK96 405 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 MECP2P51608 486 aaKnown RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 CCR4P51679 360 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 KCTD9Q7L273 389 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 GPR26Q8NDV2 337 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 GPRC5AQ8NFJ5 357 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 DYNC2LI1Q8TCX1 351 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SLC25A36Q96CQ1 311 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 PCYT2Q99447 389 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 TUT1Q9H6E5 874 aaKnown RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 DKKL1Q9UK85 242 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 LMO7Q8WWI1 1683 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 BTBD17A6NE02 478 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ANKRD28O15084 1053 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SCO2O43819 266 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 NUDT14O95848 222 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 CD1DP15813 335 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 PRKACGP22612 351 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 NDUFS1P28331 727 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 BDH1Q02338 343 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SERINC3Q13530 473 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ECM1Q16610 540 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ABLIM2Q6H8Q1 611 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 RBMS3Q6XE24 437 aaKnown RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 C19orf35Q6ZS72 473 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 CHST9Q7L1S5 443 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ADGRA1Q86SQ6 560 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 TEX26Q8N6G2 289 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 LILRB1Q8NHL6 650 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 GGHQ92820 318 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ZBTB45Q96K62 511 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 LRR1Q96L50 414 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 HIF3AQ9Y2N7 669 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ACTL7AQ9Y615 435 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 A0A087WZY1 265 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 TCRBV7S3A2A0A539 114 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SLC22A23A1A5C7 686 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 LINC00862A6NCI5 91 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 E7EQ34 232 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 GOSR2O14653 212 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 PNPP00491 289 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 TCRBP04435 133 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 FABP1P07148 127 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 BDKRB2P30411 391 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 HOXD11P31277 338 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 GPR1P46091 355 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 CLDN20P56880 219 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 GRIK4Q16099 956 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 PAQR3Q6TCH7 311 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 WDR88Q6ZMY6 472 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 B3GNT8Q7Z7M8 397 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 RASGEF1AQ8N9B8 481 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ZNF527Q8NB42 609 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 DNAAF1Q8NEP3 725 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 CHAC2Q8WUX2 184 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 GLYATL1Q969I3 302 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 WDFY2Q96P53 400 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 CNN2Q99439 309 aaKnown RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 DIMT1Q9UNQ2 313 aaKnown RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SPO11Q9Y5K1 396 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 NRCAMQ92823 1304 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 LOC100509620A0A075B734 347 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 RECQL4O94761 1208 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SLC16A8O95907 504 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 BPIP17213 487 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 PDZK1IP1Q13113 114 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SELENBP1Q13228 472 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SOHLH1Q5JUK2 328 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 UBE2NLQ5JXB2 153 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 OTUD1Q5VV17 481 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 PHYKPLQ8IUZ5 450 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 OR2AJ1Q8NGZ0 328 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 TGM7Q96PF1 710 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ZNF300Q96RE9 604 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 CCM2Q9BSQ5 444 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 TMPRSS11EQ9UL52 423 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ELOA3CA0A087WX78 387 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-216ENST00000569240 SIGLEC6O43699 453 aa6.79□□□□□ -1.32
CNOT1-216ENST00000569240 FOXD2O60548 495 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-216ENST00000569240 RAB3DO95716 219 aa6.79□□□□□ -1.32
CNOT1-216ENST00000569240 TGFB1P01137 390 aa6.79□□□□□ -1.32
CNOT1-216ENST00000569240 TGM1P22735 817 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms