RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 ADAMTS15Q8TE58 950 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 TFAP2CQ92754 450 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 ZNF607Q96SK3 696 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 BARD1Q99728 777 aaKnown RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 RBM4BQ9BQ04 359 aaKnown RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 RBM4Q9BWF3 364 aaKnown RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 SPRTNQ9H040 489 aaPredicted RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 ERVMER34-1Q9H9K5 563 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 A4GALTQ9NPC4 353 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 C8orf4Q9NR00 106 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 PDP1Q9P0J1 537 aaPredicted RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 KIF17Q9P2E2 1029 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 SUSD2Q9UGT4 822 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 PLCL2Q9UPR0 1127 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 FAM32AQ9Y421 112 aaKnown RBP6.64□□□□□ -1.35
SMG1-215ENST00000568239 ORC6Q9Y5N6 252 aa6.64□□□□□ -1.35
SMG1-215ENST00000568239 PRAMEF27A3QJZ7 478 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 OR2W5A6NFC9 320 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 PATE3B3GLJ2 98 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 TMEM150CB9EJG8 249 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 J3KTA2 159 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 B4GAT1O43505 415 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 OR10H2O60403 315 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 MED26O95402 600 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 THRBP10828 461 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 ATP6V1B1P15313 513 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 HOXA6P31267 233 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 CRISP3P54108 245 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 TPD52P55327 224 aaPredicted RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 PCBP3P57721 371 aaKnown RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 SKP1P63208 163 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 SPIBQ01892 262 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 STX4Q12846 297 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 SHBQ15464 509 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 C16orf62Q7Z3J2 963 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 SLC30A8Q8IWU4 369 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 ATG16L2Q8NAA4 619 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 PROX1Q92786 737 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 MOAP1Q96BY2 351 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 OR7D2Q96RA2 312 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 QRSL1Q9H0R6 528 aaKnown RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 GAREM1Q9H706 876 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 PRMT8Q9NR22 394 aaPredicted RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 THUMPD1Q9NXG2 353 aaKnown RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 NDUFAF4Q9P032 175 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 RHCGQ9UBD6 479 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 ZNF639Q9UID6 485 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 GMEB2Q9UKD1 530 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 PILRBQ9UKJ0 227 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 KCNE3Q9Y6H6 103 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 CSNK1G3Q9Y6M4 447 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 TMEM229AB2RXF0 380 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 CYR61O00622 381 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 PEX14O75381 377 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 SERPINB7O75635 380 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 OR2B3O76000 313 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 PDE9AO76083 593 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 GPR75O95800 540 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 GIMD1P0DJR0 217 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 EPHA8P29322 1005 aaPredicted RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 DNAJA1P31689 397 aaKnown RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 CAPGP40121 348 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 RFX3P48380 749 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 EPHA4P54764 986 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 CDH12P55289 794 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 RAB38P57729 211 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 HPCAP84074 193 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 MYBPC3Q14896 1274 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 CEBPEQ15744 281 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 ATAD3BQ5T9A4 648 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 PRAMEF17Q5VTA0 474 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 TTLL10Q6ZVT0 673 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 CCDC80Q76M96 950 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 KRT73Q86Y46 540 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 CHERPQ8IWX8 916 aaKnown RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 MAML2Q8IZL2 1156 aaPredicted RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 ST13P4Q8IZP2 240 aaPredicted RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 SFXN5Q8TD22 340 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 GEMIN6Q8WXD5 167 aaKnown RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 CCDC74AQ96AQ1 378 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 C7orf34Q96L11 122 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 OSBPL10Q9BXB5 764 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 TOR3AQ9H497 397 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 BATF3Q9NR55 127 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 IFT80Q9P2H3 777 aaPredicted RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 ATXN7L1Q9ULK2 861 aaPredicted RBP6.63□□□□□ -1.35
SMG1-215ENST00000568239 ZNF451Q9Y4E5 1061 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 GPR179Q6PRD1 2367 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 TNFRSF11BO00300 401 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 H6PDO95479 791 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 SEMG1P04279 462 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 IFNW1P05000 195 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 FESP07332 822 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 CYP4B1P13584 511 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 ITGA2P17301 1181 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 IGFBP5P24593 272 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 AVPR1BP47901 424 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 ITGA1P56199 1179 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 HSD11B2P80365 405 aa6.63□□□□□ -1.35
SMG1-215ENST00000568239 MYBPC1Q00872 1141 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms