RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 MED27Q6P2C8 311 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 ENPP6Q6UWR7 440 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 PDPRQ8NCN5 879 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 OR1J4Q8NGS1 313 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 SLC44A1Q8WWI5 657 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 UCN3Q969E3 161 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 MS4A14Q96JA4 679 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 CCL19Q99731 98 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 CENPKQ9BS16 269 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 PACSIN3Q9UKS6 424 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 PSAT1Q9Y617 370 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 TEX264Q9Y6I9 313 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 DOCK7Q96N67 2140 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 TRIM64A6NGJ6 449 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 TRIM64BA6NI03 449 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 CRLF1O75462 422 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 CRHP06850 196 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 RHOXF2BP0C7M4 288 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 PAX1P15863 534 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 SOX18P35713 384 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 MGAT5Q09328 741 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 SETDB1Q15047 1291 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 PPP1R7Q15435 360 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 TMEM64Q6YI46 380 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 OR7G3Q8NG95 312 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 PPP1R14CQ8TAE6 165 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 ADIPOR1Q96A54 375 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 ESAMQ96AP7 390 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 INTS12Q96CB8 462 aaKnown RBP16.87■□□□□ 0.29
TPM1-226ENST00000560959 MCMBPQ9BTE3 642 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 NSMCE4AQ9NXX6 385 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 TSC22D4Q9Y3Q8 395 aa16.87■□□□□ 0.29
TPM1-226ENST00000560959 SIAH2O43255 324 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 CNOT4O95628 575 aaKnown RBP16.86■□□□□ 0.29
TPM1-226ENST00000560959 CRYGSP22914 178 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 PIK3CBP42338 1070 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 ATP6V0D1P61421 351 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 POU4F1Q01851 419 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 FUT7Q11130 342 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 SNTA1Q13424 505 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 MRM1Q6IN84 353 aaKnown RBP16.86■□□□□ 0.29
TPM1-226ENST00000560959 SLC30A6Q6NXT4 461 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 LRRC70Q7Z2Q7 622 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 YRDCQ86U90 279 aaKnown RBP16.86■□□□□ 0.29
TPM1-226ENST00000560959 SPC24Q8NBT2 197 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 PERPQ96FX8 193 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 CFAP36Q96G28 342 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 WFIKKN1Q96NZ8 548 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 CD244Q9BZW8 370 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 OR51B5Q9H339 312 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 RHOJQ9H4E5 214 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 CXorf21Q9HAI6 301 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 LYARQ9NX58 379 aaKnown RBP16.86■□□□□ 0.29
TPM1-226ENST00000560959 MOCS1Q9NZB8 636 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 C6orf203Q9P0P8 240 aaPredicted RBP16.86■□□□□ 0.29
TPM1-226ENST00000560959 CLCF1Q9UBD9 225 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 ASB4Q9Y574 426 aa16.86■□□□□ 0.29
TPM1-226ENST00000560959 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 H0Y3Z8 333 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 PGRMC1O00264 195 aaKnown RBP16.85■□□□□ 0.29
TPM1-226ENST00000560959 SAP18O00422 153 aaKnown RBP16.85■□□□□ 0.29
TPM1-226ENST00000560959 GNB5O14775 395 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 TMCC2O75069 709 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 CBR3O75828 277 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 TNFSF13O75888 250 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 ABCB1P08183 1280 aaPredicted RBP16.85■□□□□ 0.29
TPM1-226ENST00000560959 PCNAP12004 261 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 RAP1GDS1P52306 607 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 HNRNPH2P55795 449 aaKnown RBP16.85■□□□□ 0.29
TPM1-226ENST00000560959 FBXO48Q5FWF7 155 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 ZNF615Q8N8J6 731 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 DOK4Q8TEW6 326 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 CTHRC1Q96CG8 243 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 SORBS1Q9BX66 1292 aaKnown RBP16.85■□□□□ 0.29
TPM1-226ENST00000560959 WDR41Q9HAD4 459 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 CD274Q9NZQ7 290 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 ASIC3Q9UHC3 531 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 EXO1Q9UQ84 846 aaKnown RBP16.85■□□□□ 0.29
TPM1-226ENST00000560959 CHMP2BQ9UQN3 213 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 JRKLQ9Y4A0 524 aa16.85■□□□□ 0.29
TPM1-226ENST00000560959 GOLGA6L10A0A0M3HER8 536 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 GOLGA6L6A8MZA4 724 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 PLPP1O14494 284 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 SNPHO15079 494 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 CCNT2O60583 730 aaKnown RBP16.84■□□□□ 0.29
TPM1-226ENST00000560959 SH3BGRLO75368 114 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 IVDP26440 423 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 ABCD3P28288 659 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 SSTR4P31391 388 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 SLC12A2P55011 1212 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 FAM27E3Q08E93 113 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 CBLBQ13191 982 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 MORF4L2Q15014 288 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 NUP54Q7Z3B4 507 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 TRIM42Q8IWZ5 723 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 OR7G1Q8NGA0 311 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 ACTRT1Q8TDG2 376 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 IGFBPL1Q8WX77 278 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 G6PC3Q9BUM1 346 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 OR2B2Q9GZK3 357 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms