RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 NOTCH2Q04721 2471 aa10.97□□□□□ -0.65
HERC1-202ENST00000558324 TEX15Q9BXT5 2789 aa10.97□□□□□ -0.65
HERC1-202ENST00000558324 TRGV5A0A0B4J1U4 118 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 PCDH7O60245 1069 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 ULK1O75385 1050 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 IGHG3P01860 377 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 SHBGP04278 402 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 IMPDH1P20839 514 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 KIR3DL1P43629 444 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 TRPC1P48995 793 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 MAN2A2P49641 1150 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 PRKAA2P54646 552 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 NUP107P57740 925 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 HMGCS1Q01581 520 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 BTKQ06187 659 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 PMPCAQ10713 525 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 FUT7Q11130 342 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 CSTF3Q12996 717 aaKnown RBP10.96□□□□□ -0.65
HERC1-202ENST00000558324 LCP2Q13094 533 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 SLC10A1Q14973 349 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 RPS6KA2Q15349 733 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 LTB4RQ15722 352 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 NTRK2Q16620 822 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 GXYLT1Q4G148 440 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 BICRALQ6AI39 1079 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 TMEM211Q6ICI0 200 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 GDF7Q7Z4P5 450 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 CCDC71Q8IV32 467 aaPredicted RBP10.96□□□□□ -0.65
HERC1-202ENST00000558324 DND1Q8IYX4 353 aaKnown RBP10.96□□□□□ -0.65
HERC1-202ENST00000558324 SIMC1Q8NDZ2 872 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 ACMSDQ8TDX5 336 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 RND1Q92730 232 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 TM4SF18Q96CE8 201 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 FAIM2Q9BWQ8 316 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 EBPLQ9BY08 206 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 ACPTQ9BZG2 426 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 SLC6A15Q9H2J7 730 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 PROK2Q9HC23 129 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 ZFP64Q9NPA5 681 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 ALKBH4Q9NXW9 302 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 MAT2BQ9NZL9 334 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 CNIH4Q9P003 139 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 SPRR3Q9UBC9 169 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 FETUBQ9UGM5 382 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 ACAD8Q9UKU7 415 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 CES1P1Q9UKY3 287 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 CNOT11Q9UKZ1 510 aaKnown RBP10.96□□□□□ -0.65
HERC1-202ENST00000558324 EMCNQ9ULC0 261 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 RNF6Q9Y252 685 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 NPFFR2Q9Y5X5 522 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 ZNF780BQ9Y6R6 833 aa10.96□□□□□ -0.65
HERC1-202ENST00000558324 CRYBG3Q68DQ2 2970 aa10.96□□□□□ -0.66
HERC1-202ENST00000558324 NCOA6Q14686 2063 aaPredicted RBP10.96□□□□□ -0.66
HERC1-202ENST00000558324 CELSR2Q9HCU4 2923 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 CACNA1DQ01668 2161 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 GNG14A0A1W2PPG7 69 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 NKX2-6A6NCS4 301 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 OR14I1A6ND48 311 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 FIGNL2A6NMB9 653 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 CAPN14A8MX76 684 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 AQP7O14520 342 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 TP53I11O14683 189 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 BCKDKO14874 412 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 GLRA3O75311 464 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 ATP1B1P05026 303 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 GSTA1P08263 222 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 IL3P08700 152 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 MYL2P10916 166 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 HSD3B1P14060 373 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 KRT15P19012 456 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 CSNK2A2P19784 350 aaPredicted RBP10.95□□□□□ -0.66
HERC1-202ENST00000558324 ENDOUP21128 410 aaKnown RBP10.95□□□□□ -0.66
HERC1-202ENST00000558324 GPX3P22352 226 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 HSD3B2P26439 372 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 ACVR2AP27037 513 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 GDF1P27539 372 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 PTGER4P35408 488 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 TMED10P49755 219 aaKnown RBP10.95□□□□□ -0.66
HERC1-202ENST00000558324 NRG3P56975 720 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 MRPS35P82673 323 aaKnown RBP10.95□□□□□ -0.66
HERC1-202ENST00000558324 ACSM2AQ08AH3 577 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 HYAL4Q2M3T9 481 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 PRICKLE4Q2TBC4 344 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 ACSM2BQ68CK6 577 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 LRRC25Q8N386 305 aaPredicted RBP10.95□□□□□ -0.66
HERC1-202ENST00000558324 LIX1Q8N485 282 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 OR7G1Q8NGA0 311 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 OR10Q1Q8NGQ4 319 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 CDC26Q8NHZ8 85 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 EPS8L3Q8TE67 593 aaKnown RBP10.95□□□□□ -0.66
HERC1-202ENST00000558324 CHTF18Q8WVB6 975 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 ADIPOR1Q96A54 375 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 TP53INP1Q96A56 240 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 EXOSC8Q96B26 276 aaKnown RBP10.95□□□□□ -0.66
HERC1-202ENST00000558324 L3HYPDHQ96EM0 354 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 CNRIP1Q96F85 164 aaPredicted RBP10.95□□□□□ -0.66
HERC1-202ENST00000558324 APIPQ96GX9 242 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 ZNF597Q96LX8 424 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 ITPAQ9BY32 194 aa10.95□□□□□ -0.66
HERC1-202ENST00000558324 TRIM8Q9BZR9 551 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms