RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 CDC73Q6P1J9 531 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 C6orf89Q6UWU4 347 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 KCTD8Q6ZWB6 473 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 RFPL4BQ6ZWI9 263 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 TIPARPQ7Z3E1 657 aaKnown RBP4.53□□□□□ -1.68
ATXN3-218ENST00000553309 AKAP14Q86UN6 197 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 NFE4Q86UQ8 179 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 CLVS1Q8IUQ0 354 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-218ENST00000553309 BBS7Q8IWZ6 715 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 C4orf19Q8IY42 314 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 ST13P4Q8IZP2 240 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-218ENST00000553309 SLC25A45Q8N413 288 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 PPFIBP2Q8ND30 876 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 OR6C4Q8NGE1 309 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 OR52K1Q8NGK4 314 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 NCOA7Q8NI08 942 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 ETNPPLQ8TBG4 499 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 SPPL2BQ8TCT7 592 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 PIGTQ969N2 578 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 WBP2Q969T9 261 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 ZUFSPQ96AP4 578 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 HDAC11Q96DB2 347 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 STAMBPL1Q96FJ0 436 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 SLC47A1Q96FL8 570 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 PPP1R13BQ96KQ4 1090 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 SENP8Q96LD8 212 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 HARBI1Q96MB7 349 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 QRFPRQ96P65 431 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 NUDCD1Q96RS6 583 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 PCGF1Q9BSM1 259 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 DESI2Q9BSY9 194 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 LRRC1Q9BTT6 524 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 TUBB2BQ9BVA1 445 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 SNX25Q9H3E2 840 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 FKRPQ9H9S5 495 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 SEBOXQ9HB31 216 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-218ENST00000553309 C6orf50Q9HD87 102 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 POLE3Q9NRF9 147 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 IARS2Q9NSE4 1012 aaKnown RBP4.53□□□□□ -1.68
ATXN3-218ENST00000553309 SAMSN1Q9NSI8 373 aaKnown RBP4.53□□□□□ -1.68
ATXN3-218ENST00000553309 TAAR2Q9P1P5 351 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 UXTQ9UBK9 157 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-218ENST00000553309 TEKT2Q9UIF3 430 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 MKLN1Q9UL63 735 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 HPCAL4Q9UM19 191 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 TP53TG5Q9Y2B4 290 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 HEY1Q9Y5J3 304 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 COL27A1Q8IZC6 1860 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-218ENST00000553309 DOCK9Q9BZ29 2069 aa4.53□□□□□ -1.68
ATXN3-218ENST00000553309 CSPG4Q6UVK1 2322 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 ANAPC1Q9H1A4 1944 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 FBN1P35555 2871 aaKnown RBP4.52□□□□□ -1.69
ATXN3-218ENST00000553309 PTPRJQ12913 1337 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 GOLGA8QA0A0J9YX86 632 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 C1orf232A0A0U1RR37 186 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 PVALEFA0A1B0GWK0 134 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 A0A1W2PR77 199 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 GOLGA8OA6NCC3 632 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 GOLGA8NF8WBI6 632 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 CACNB4O00305 520 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-218ENST00000553309 DVL1O14640 695 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 DKC1O60832 514 aaKnown RBP eCLIP4.52□□□□□ -1.69
ATXN3-218ENST00000553309 PALMO75781 387 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 KLHL2O95198 593 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 TGDSO95455 350 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 IFNA14P01570 189 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 GSTA1P08263 222 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 UBTFL6P0CB48 400 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-218ENST00000553309 PRKAR1AP10644 381 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 ATP6V1B1P15313 513 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 PDGFRAP16234 1089 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 HSPA9P38646 679 aaKnown RBP4.52□□□□□ -1.69
ATXN3-218ENST00000553309 SLC1A1P43005 524 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 RGS7P49802 495 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 PDX1P52945 283 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 DVL1P1P54792 670 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-218ENST00000553309 TAS2R38P59533 333 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 PITX1P78337 314 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-218ENST00000553309 RELAQ04206 551 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 TBX2Q13207 712 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-218ENST00000553309 DCTN2Q13561 401 aaKnown RBP4.52□□□□□ -1.69
ATXN3-218ENST00000553309 CCNG2Q16589 344 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 CDKN3Q16667 212 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 MRGPRG-AS1Q2M3A8 158 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 TMEM35AQ53FP2 167 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 PRR30Q53SZ7 412 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-218ENST00000553309 ODF2Q5BJF6 829 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 CLVS2Q5SYC1 327 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 DCST1Q5T197 706 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 PDSS1Q5T2R2 415 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 SHEQ5VZ18 495 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 FRG2Q64ET8 278 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 KCTD16Q68DU8 428 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 OR52E8Q6IFG1 317 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 TTI2Q6NXR4 508 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 SPNS3Q6ZMD2 512 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 TPGS1Q6ZTW0 290 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 CDH26Q8IXH8 852 aa4.52□□□□□ -1.69
ATXN3-218ENST00000553309 ADGRF2Q8IZF7 708 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms