RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 FOXF2Q12947 444 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 SLMAPQ14BN4 828 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 CYP20A1Q6UW02 462 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 PLXDC2Q6UX71 529 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 C3orf62Q6ZUJ4 267 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 YRDCQ86U90 279 aaKnown RBP13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 PACS2Q86VP3 889 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 KIF18BQ86Y91 864 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 ABTB1Q969K4 478 aaPredicted RBP13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 ADIPOR1Q96A54 375 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 DPH5Q9H2P9 285 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 DDX31Q9H8H2 851 aaKnown RBP13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 CXorf21Q9HAI6 301 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 NMRAL1Q9HBL8 299 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 SNX15Q9NRS6 342 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 LYARQ9NX58 379 aaKnown RBP13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 JKAMPQ9P055 326 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 ANGPTL3Q9Y5C1 460 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 IKBKGQ9Y6K9 419 aa13.53□□□□□ -0.24
TMEM106C-216ENST00000551305 A0A1W2PPR1 153 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 C2orf72A6NCS6 295 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 MBD3L4A6NDZ8 208 aaPredicted RBP13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 MBD3L3A6NE82 208 aaPredicted RBP13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 MBD3L5A6NJ08 208 aaPredicted RBP13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 CD8B2A6NJW9 211 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 CLCA1A8K7I4 914 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 CAPN14A8MX76 684 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 LTA4HP09960 611 aaKnown RBP13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 GALNSP34059 522 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 SPRP35270 261 aaPredicted RBP13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 SLCO1A2P46721 670 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 CPSF6Q16630 551 aaKnown RBP eCLIP13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 NHSL2Q5HYW2 709 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 GRTP1Q5TC63 336 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 HLA-DQA1Q5Y7H0 255 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 KRTAP1-3Q8IUG1 177 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 PPM1NQ8N819 430 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 ZNF615Q8N8J6 731 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 MBD3L2Q8NHZ7 208 aaPredicted RBP13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 SLC44A1Q8WWI5 657 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 YIPF4Q9BSR8 244 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 OR10A5Q9H207 317 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 ACTR8Q9H981 624 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 PCDHGA11Q9Y5H2 935 aa13.52□□□□□ -0.25
TMEM106C-216ENST00000551305 ANKHD1Q8IWZ3 2542 aaKnown RBP13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 CCDC188H7C350 402 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 ABCB1P08183 1280 aaPredicted RBP13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 PTPN6P29350 595 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 OPRM1P35372 400 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 IRF9Q00978 393 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 FUT7Q11130 342 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 SETDB1Q15047 1291 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 NNATQ16517 81 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 PFKFB4Q16877 469 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 KBTBD12Q3ZCT8 623 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 LIPJQ5W064 366 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 TIGD3Q6B0B8 471 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 TBC1D1Q86TI0 1168 aaPredicted RBP13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 BIVMQ86UB2 503 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 GALNT12Q8IXK2 581 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 FAM83FQ8NEG4 500 aaPredicted RBP13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 KCTD4Q8WVF5 259 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 NTNG2Q96CW9 530 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 C18orf12Q96KH6 178 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 CALHM2Q9HA72 323 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 WDR41Q9HAD4 459 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 DTX4Q9Y2E6 619 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 RNF11Q9Y3C5 154 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 TSC22D4Q9Y3Q8 395 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 SAR1BQ9Y6B6 198 aa13.51□□□□□ -0.25
TMEM106C-216ENST00000551305 H0YIV9 168 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 HRGP04196 525 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 TMIGD3P0DMS9 266 aaPredicted RBP13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 CD53P19397 219 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 NT5EP21589 574 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 PIK3R1P27986 724 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 ABCD3P28288 659 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 ARFIP1P53367 373 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 DCAF7P61962 342 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 SORDQ00796 357 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 SRYQ05066 204 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 CUL3Q13618 768 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 SF3B4Q15427 424 aaKnown RBP eCLIP13.5□□□□□ -0.253e-6■■■■■ 30.2
TMEM106C-216ENST00000551305 ANGPTL8Q6UXH0 198 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 CYS1Q717R9 158 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 LUZP2Q86TE4 346 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 VWA5B2Q8N398 1253 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 OR1J4Q8NGS1 313 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 WDR20Q8TBZ3 569 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 TMEM41AQ96HV5 264 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 CDK15Q96Q40 435 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 NODALQ96S42 347 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 SECISBP2Q96T21 854 aaKnown RBP13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 TUBA1CQ9BQE3 449 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 RBM24Q9BX46 236 aaKnown RBP13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 NXF5Q9H1B4 397 aaKnown RBP13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 KCNF1Q9H3M0 494 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 NEUROD4Q9HD90 331 aa13.5□□□□□ -0.25
TMEM106C-216ENST00000551305 EIF3HO15372 352 aaKnown RBP eCLIP13.49□□□□□ -0.25
TMEM106C-216ENST00000551305 SIX3O95343 332 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms