RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 F7P08709 466 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ZNF10P21506 573 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 GNALP38405 381 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ZNF140P52738 457 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 MS4A2Q01362 244 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 AP5B1Q2VPB7 878 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 PTCHD3Q3KNS1 767 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ZNF529Q6P280 563 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 PRSS55Q6UWB4 352 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 KIAA1324Q6UXG2 1013 aaKnown RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 COMTD1Q86VU5 262 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ZDHHC21Q8IVQ6 265 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 SLC39A11Q8N1S5 342 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ZNF548Q8NEK5 533 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 OR1J4Q8NGS1 313 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 OR13F1Q8NGS4 319 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 SNX33Q8WV41 574 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 PDLIM5Q96HC4 596 aaKnown RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 SAMD11Q96NU1 681 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 PPP1R14DQ9NXH3 145 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 GON4LQ3T8J9 2241 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 A0A1W2PPL8 197 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 AKR7A2O43488 359 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 PRAMEF2O60811 474 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 RETP07949 1114 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 CBLP22681 906 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 HOXD9P28356 352 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 DGKEP52429 567 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 GBX2P52951 348 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 DLX5P56178 289 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 CACNG1Q06432 222 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 KCNAB2Q13303 367 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 GPR19Q15760 415 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 BCL2A1Q16548 175 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 TATDN3Q17R31 274 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 MPPE1Q53F39 396 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ARTNQ5T4W7 220 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 PRAMEF13Q5VWM6 474 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 RPL13AP3Q6NVV1 102 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 LINGO4Q6UY18 593 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 RNF165Q6ZSG1 346 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 CLDN22Q8N7P3 220 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 OR9I1Q8NGQ6 314 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ZFAND1Q8TCF1 268 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 KIAA1191Q96A73 305 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 FAIM2Q9BWQ8 316 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 PIGMQ9H3S5 423 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 DZANK1Q9NVP4 752 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 SPATA6Q9NWH7 488 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 MARK1Q9P0L2 795 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 TEX13CA0A0J9YWL9 993 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 F5H0A9 414 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 LRATO95237 230 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 HTR3BO95264 441 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 SMIM6P0DI80 62 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ACADMP11310 421 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 CR2P20023 1033 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 CORO1AP31146 461 aaKnown RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 RANP62826 216 aaKnown RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 CTBP1Q13363 440 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 GPR33Q49SQ1 333 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 UBE2R2Q712K3 238 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 LYSMD3Q7Z3D4 306 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 GLT6D1Q7Z4J2 308 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 GPSM1Q86YR5 675 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 PHACTR4Q8IZ21 702 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 CBARPQ8N350 705 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 SLC44A3Q8N4M1 653 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 POGLUT1Q8NBL1 392 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 NETO2Q8NC67 525 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 PHYHIPQ92561 330 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 KCNJ9Q92806 393 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 OR52E6Q96RD3 313 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 PAPOLGQ9BWT3 736 aaKnown RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 CST11Q9H112 138 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 MUC3BQ9H195 1237 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 MRPL17Q9NRX2 175 aaKnown RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ZNF282Q9UDV7 671 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 SMCO3A2RU48 225 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 A8MT66 165 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 J3KR12 359 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 J3QR89 54 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 RGS9O75916 674 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ATG12O94817 140 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 OLFM2O95897 454 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 IGSF6O95976 241 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 POU2F2P09086 479 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ITGAMP11215 1152 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 PPP3CBP16298 524 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 CTRB1P17538 263 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 OR1D2P34982 312 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 SOX9P48436 509 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 PSMD8P48556 350 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 VSX2P58304 361 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 CTRB2Q6GPI1 263 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ZNF705AQ6ZN79 300 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-214ENST00000540109 HIST2H3AQ71DI3 136 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 ST7LQ8TDW4 575 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 CNTNAP3BQ96NU0 1288 aa5.78□□□□□ -1.48
PTPRD-214ENST00000540109 PGLYRP2Q96PD5 576 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms