RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 UNC119BA6NIH7 251 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 ZNF878C9JN71 531 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 I3L521 148 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 GPR39O43194 453 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 CLEC3AO75596 197 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 AHSA1O95433 338 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 SRCP12931 536 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 RPS3P23396 243 aaKnown RBP eCLIP13.85□□□□□ -0.19
CACNB1-206ENST00000539338 GPR4P46093 362 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 PDX1P52945 283 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 PRKCDQ05655 676 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 DHCR24Q15392 516 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 CATSPEREQ5SY80 951 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 C6orf132Q5T0Z8 1188 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 TMEM156Q8N614 296 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 SLC15A4Q8N697 577 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 C16orf78Q8WTQ4 265 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 HHIPQ96QV1 700 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 SLC12A9Q9BXP2 914 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 TMEM9BQ9NQ34 198 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 SDHAF3Q9NRP4 125 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 OR6C74A6NCV1 312 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 A6NHS1 94 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 C11orf98E9PRG8 122 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 ZNF208O43345 1280 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 SUOXP51687 545 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 RCAN2Q14206 197 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 ELAVL3Q14576 367 aaKnown RBP13.85□□□□□ -0.19
CACNB1-206ENST00000539338 SEC23BQ15437 767 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 UBE2Q1Q7Z7E8 422 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 TRUB1Q8WWH5 349 aaKnown RBP13.85□□□□□ -0.19
CACNB1-206ENST00000539338 TREX1Q9NSU2 369 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 VAPAQ9P0L0 249 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 SOX1O00570 391 aaPredicted RBP13.85□□□□□ -0.19
CACNB1-206ENST00000539338 EEF1E1O43324 174 aaKnown RBP13.85□□□□□ -0.19
CACNB1-206ENST00000539338 SMAD6O43541 496 aaKnown RBP13.85□□□□□ -0.19
CACNB1-206ENST00000539338 LATO43561 262 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 GJB3O75712 270 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 RLN2P04090 185 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 DCTP40126 519 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 RABIFP47224 123 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 SGCBQ16585 318 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 ZNF181Q2M3W8 571 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 BTBD16Q32M84 506 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 KIAA0319Q5VV43 1072 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 CEACAM19Q7Z692 300 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 KLBQ86Z14 1044 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 GPR150Q8NGU9 434 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 OR8S1Q8NH09 359 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 GATA6Q92908 595 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 METTL8Q9H825 291 aaKnown RBP13.85□□□□□ -0.19
CACNB1-206ENST00000539338 A0A1W2PQU0 124 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 C1orf226A1L170 272 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 RNF13O43567 381 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 C15orf40Q8WUR7 153 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 RFT1Q96AA3 541 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 WDR92Q96MX6 357 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 IER2Q9BTL4 223 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 FZD3Q9NPG1 666 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 STOX2Q9P2F5 926 aaPredicted RBP13.85□□□□□ -0.19
CACNB1-206ENST00000539338 GMEB1Q9Y692 573 aa13.85□□□□□ -0.19
CACNB1-206ENST00000539338 LRRN3E7EW58 273 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 L7N2F9 121 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 JUNDP17535 347 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 ACVR1BP36896 505 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 NOVA1P51513 510 aaKnown RBP13.84□□□□□ -0.19
CACNB1-206ENST00000539338 TRIM61Q5EBN2 209 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 TLDC1Q6P9B6 456 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 Q8N402 240 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 FIBINQ8TAL6 211 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 LRRN3Q9H3W5 708 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 MEMO1Q9Y316 297 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 A0A1B0GTW7 788 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 RFXAPO00287 272 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 LATS1O95835 1130 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 PYCR1P32322 319 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 VIPR2P41587 438 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 LRIT3Q3SXY7 679 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 RPS26P11Q5JNZ5 115 aaPredicted RBP13.84□□□□□ -0.19
CACNB1-206ENST00000539338 OR4C11Q6IEV9 310 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 CCBE1Q6UXH8 406 aaPredicted RBP13.84□□□□□ -0.19
CACNB1-206ENST00000539338 LARP4Q71RC2 724 aaKnown RBP eCLIP13.84□□□□□ -0.19
CACNB1-206ENST00000539338 TSPYL5Q86VY4 417 aaPredicted RBP13.84□□□□□ -0.19
CACNB1-206ENST00000539338 CCDC120Q96HB5 630 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 RNF121Q9H920 327 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 PRTFDC1Q9NRG1 225 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 NOP16Q9Y3C1 178 aaKnown RBP13.84□□□□□ -0.19
CACNB1-206ENST00000539338 PCDHGA2Q9Y5H1 932 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 HCFC2Q9Y5Z7 792 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 UBR2Q8IWV8 1755 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 METTL21EPA6NDL7 271 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 PENKP01210 267 aaPredicted RBP13.84□□□□□ -0.19
CACNB1-206ENST00000539338 RPS17P08708 135 aaKnown RBP13.84□□□□□ -0.19
CACNB1-206ENST00000539338 HOXD8P13378 290 aaPredicted RBP13.84□□□□□ -0.19
CACNB1-206ENST00000539338 FOXC1Q12948 553 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 TMEM17Q86X19 198 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 OR4K17Q8NGC6 315 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 OR52N2Q8NGI0 321 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 HDHD5Q9BXW7 423 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 OR1A2Q9Y585 309 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms