RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 LRRTM2O43300 516 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 NME6O75414 186 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 UQCRC2P22695 453 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 ITGB7P26010 798 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 ELAVL4P26378 380 aaKnown RBP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 APEX1P27695 318 aaKnown RBP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 HTR2BP41595 481 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 SOX9P48436 509 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 SLC9A3P48764 834 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 MANFP55145 182 aaKnown RBP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 CHRNEQ04844 493 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 E2F2Q14209 437 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 ZNF284Q2VY69 593 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 YIF1BQ5BJH7 314 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 OR2G6Q5TZ20 316 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 SAXO2Q658L1 398 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 FAM71E1Q6IPT2 247 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 TCTN3Q6NUS6 607 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 GDPD4Q6W3E5 623 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 C12orf40Q86WS4 652 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 RDH10Q8IZV5 341 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 HORMAD2Q8N7B1 307 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 YIPF7Q8N8F6 280 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 RASGEF1AQ8N9B8 481 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 ZNF480Q8WV37 535 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 TMEM19Q96HH6 336 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 LRR1Q96L50 414 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 KXD1Q9BQD3 176 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 FZD3Q9NPG1 666 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 DMRT3Q9NQL9 472 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 SH2B3Q9UQQ2 575 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 ARRDC5A6NEK1 342 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 PDE9AO76083 593 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 RECKO95980 971 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 C1GALT1C1LP0DN25 315 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 NR2F6P10588 404 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 SLC2A2P11168 524 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 ENDOUP21128 410 aaKnown RBP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 ETV5P41161 510 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 MAN2A2P49641 1150 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 ETV1P50549 477 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 PCDH1Q08174 1060 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 PIN1Q13526 163 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 GINS1Q14691 196 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 GLCCI1Q86VQ1 547 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 SYT14Q8NB59 555 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 GALNT6Q8NCL4 622 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 ZNF740Q8NDX6 193 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 GATAD2BQ8WXI9 593 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 MTERF3Q96E29 417 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 RNF170Q96K19 258 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 SLC6A18Q96N87 628 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 TM9SF2Q99805 663 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 TMEM245Q9H330 911 aa11.85□□□□□ -0.51
CAPN1-208ENST00000527323 PLEKHB1Q9UF11 243 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-208ENST00000527323 FAM240BA0A1B0GVZ2 78 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 PIPSLA2A3N6 862 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 FAAHO00519 579 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 POLR1CO15160 346 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-208ENST00000527323 PLA2G10O15496 165 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 PRKYO43930 277 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 RAB36O95755 333 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 MSL3P1P0C860 447 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 NPPBP16860 134 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 SLC6A11P48066 632 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 SNAPC1Q16533 368 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 TATDN3Q17R31 274 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 HSDL2Q6YN16 418 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 CFAP206Q8IYR0 622 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 OR52I1Q8NGK6 324 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 FGF13Q92913 245 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 TIFAQ96CG3 184 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 RIPOR3Q96MK2 946 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 EFCAB11Q9BUY7 163 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 MYNNQ9NPC7 610 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 CTPS2Q9NRF8 586 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 DKK3Q9UBP4 350 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 SEC14L3Q9UDX4 400 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 GSTK1Q9Y2Q3 226 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 DSPPQ9NZW4 1301 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 SLC30A4O14863 429 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 CASKO14936 926 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 CYP2A6P11509 494 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-208ENST00000527323 MAP2K3P46734 347 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 SNRPD2P62316 118 aaKnown RBP11.84□□□□□ -0.51
CAPN1-208ENST00000527323 RPS25P62851 125 aaKnown RBP11.84□□□□□ -0.51
CAPN1-208ENST00000527323 TMEM115Q12893 351 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-208ENST00000527323 HSPB3Q12988 150 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 C12orf73Q69YU5 71 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 PGBD2Q6P3X8 592 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 PDZD3Q86UT5 571 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 SLC30A8Q8IWU4 369 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 CLDN22Q8N7P3 220 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 ZFP41Q8N8Y5 198 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 GPR32P1Q8NGA4 272 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 AP3S1Q92572 193 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 ACAT2Q9BWD1 397 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 CLDND1Q9NY35 253 aa11.84□□□□□ -0.51
CAPN1-208ENST00000527323 KCND3Q9UK17 655 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms