RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 SPRED3Q2MJR0 410 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 NHSL2Q5HYW2 709 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 PRIMA1Q86XR5 153 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 GRAMD2AQ8IUY3 354 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 GALNT12Q8IXK2 581 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 PRR22Q8IZ63 422 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 ZNF441Q8N8Z8 693 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 FAM83FQ8NEG4 500 aaPredicted RBP10.5□□□□□ -0.73
MRPS28-206ENST00000520946 OR7G3Q8NG95 312 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 SPATA3Q8NHX4 192 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 RDH11Q8TC12 318 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 REPS1Q96D71 796 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 PIK3IP1Q96FE7 263 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 TMEM41AQ96HV5 264 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 COX4I2Q96KJ9 171 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 PIP5K1AQ99755 562 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 MED18Q9BUE0 208 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 CD244Q9BZW8 370 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 CAB39LQ9H9S4 337 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 JKAMPQ9P055 326 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 C6orf203Q9P0P8 240 aaPredicted RBP10.5□□□□□ -0.73
MRPS28-206ENST00000520946 PACSIN3Q9UKS6 424 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 IKBKGQ9Y6K9 419 aa10.5□□□□□ -0.73
MRPS28-206ENST00000520946 MAP1AP78559 2803 aaPredicted RBP10.49□□□□□ -0.73
MRPS28-206ENST00000520946 SNPHO15079 494 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 PHGDHO43175 533 aaKnown RBP10.49□□□□□ -0.73
MRPS28-206ENST00000520946 PRAMEF4O60810 478 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 SCELO95171 688 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 RCBTB2O95199 551 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 SLC35E2BP0CK96 405 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 SLC35E2P0CK97 266 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 STMN1P16949 149 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 NT5EP21589 574 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 PTX3P26022 381 aaPredicted RBP10.49□□□□□ -0.73
MRPS28-206ENST00000520946 SSTR4P31391 388 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 CASP2P42575 452 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 NAGLUP54802 743 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 FOXF2Q12947 444 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 PDIA2Q13087 525 aaKnown RBP10.49□□□□□ -0.73
MRPS28-206ENST00000520946 CBLBQ13191 982 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 PRAMEF9Q5VWM5 478 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 STEAP4Q687X5 459 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 TIGD3Q6B0B8 471 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 AAGABQ6PD74 315 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 PRSS57Q6UWY2 283 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 RAPH1Q70E73 1250 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 CXXC5Q7LFL8 322 aaKnown RBP10.49□□□□□ -0.73
MRPS28-206ENST00000520946 CXorf67Q86X51 503 aaPredicted RBP10.49□□□□□ -0.73
MRPS28-206ENST00000520946 GCNT2Q8N0V5 402 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 ZCCHC7Q8N3Z6 543 aaKnown RBP10.49□□□□□ -0.73
MRPS28-206ENST00000520946 CNEP1R1Q8N9A8 125 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 FBXO36Q8NEA4 188 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 HUS1BQ8NHY5 278 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 STAG3L4Q8TBR4 150 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 ACTRT1Q8TDG2 376 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 SLC44A1Q8WWI5 657 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 WNT2BQ93097 391 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 MTERF1Q99551 399 aaKnown RBP10.49□□□□□ -0.73
MRPS28-206ENST00000520946 TUBA1CQ9BQE3 449 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 SLC39A3Q9BRY0 314 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 DDX47Q9H0S4 455 aaKnown RBP10.49□□□□□ -0.73
MRPS28-206ENST00000520946 ACTR8Q9H981 624 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 PTBP2Q9UKA9 531 aaKnown RBP10.49□□□□□ -0.73
MRPS28-206ENST00000520946 MAPRE3Q9UPY8 281 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 CFL2Q9Y281 166 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 PPP2R2CQ9Y2T4 447 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 TEX264Q9Y6I9 313 aa10.49□□□□□ -0.73
MRPS28-206ENST00000520946 NCKAP5O14513 1909 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 INAFM1C9JVW0 142 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 CBR3O75828 277 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 FAM58BPP0C7Q3 252 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 CPN1P15169 458 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 CD1DP15813 335 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 CHMP24386 653 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 GALNSP34059 522 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 DEKP35659 375 aaKnown RBP10.48□□□□□ -0.73
MRPS28-206ENST00000520946 PIK3CBP42338 1070 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 HNRNPH2P55795 449 aaKnown RBP10.48□□□□□ -0.73
MRPS28-206ENST00000520946 FRG1Q14331 258 aaKnown RBP10.48□□□□□ -0.73
MRPS28-206ENST00000520946 ACKR1Q16570 336 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 DCST1Q5T197 706 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 OR52E8Q6IFG1 317 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 SLC30A6Q6NXT4 461 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 IFNEQ86WN2 208 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 KRTAP1-3Q8IUG1 177 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 TRIM42Q8IWZ5 723 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 KLHL7Q8IXQ5 586 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 LAS2Q8IYD9 372 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 CIARTQ8N365 385 aaPredicted RBP10.48□□□□□ -0.73
MRPS28-206ENST00000520946 PDPRQ8NCN5 879 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 NTNG2Q96CW9 530 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 OSBPL9Q96SU4 736 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 OSBPL11Q9BXB4 747 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 OR10A5Q9H207 317 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 UBQLN3Q9H347 655 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 SERHLQ9NQF3 203 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 KLHL28Q9NXS3 571 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 NUDT4Q9NZJ9 180 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 BCAP29Q9UHQ4 241 aa10.48□□□□□ -0.73
MRPS28-206ENST00000520946 MTO1Q9Y2Z2 717 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms