RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 OR10H5Q8NGA6 315 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR5T3Q8NGG3 340 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR4A15Q8NGL6 344 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR5K1Q8NHB7 308 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 TERB2Q8NHR7 220 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 GPR151Q8TDV0 419 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 C22orf15Q8WYQ4 148 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 DDX17Q92841 729 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC35C1Q96A29 364 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ECHDC3Q96DC8 303 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 PABPC5Q96DU9 382 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 L3HYPDHQ96EM0 354 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 TSPAN17Q96FV3 270 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 BSCL2Q96G97 398 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 PDLIM5Q96HC4 596 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF354BQ96LW1 612 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 C3orf30Q96M34 536 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF599Q96NL3 588 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 COL21A1Q96P44 957 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF385AQ96PM9 386 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 RAD9AQ99638 391 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 SDHCQ99643 169 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 CGRRF1Q99675 332 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 NPAS2Q99743 824 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 C7orf50Q9BRJ6 194 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 REEP2Q9BRK0 252 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF2Q9BSG1 426 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF577Q9BSK1 485 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 MENTQ9BUN1 341 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 NFKBIZQ9BYH8 718 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ACPTQ9BZG2 426 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 C20orf27Q9GZN8 174 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 DERL2Q9GZP9 239 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ENKD1Q9H0I2 346 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 PCDHAC1Q9H158 963 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 MMP28Q9H239 520 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC38A1Q9H2H9 487 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 IKZF4Q9H2S9 585 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR51B6Q9H340 312 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 TRPV4Q9HBA0 871 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 SARS2Q9NP81 518 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ITM2CQ9NQX7 267 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 SMCO4Q9NRQ5 59 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 RNF146Q9NTX7 359 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 C14orf119Q9NWQ9 140 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 CLDND1Q9NY35 253 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 TAS2R10Q9NYW0 307 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 NLGN3Q9NZ94 848 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 APOBEC3BQ9UH17 382 aaKnown RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 IL19Q9UHD0 177 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 CPA4Q9UI42 421 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF222Q9UK12 451 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 COA3Q9Y2R0 106 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 PCDHA10Q9Y5I2 948 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 NWD2Q9ULI1 1742 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 LMO7Q8WWI1 1683 aa4.57□□□□□ -1.68
HMGB1P19-201ENST00000517578 TAF1LQ8IZX4 1826 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 IGSF9BQ9UPX0 1349 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 NALCNQ8IZF0 1738 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MEIKINA0A087WXM9 373 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 A0A087X0M5 115 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 A0A0U1RQV5 110 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 A0A1B0GX30 115 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 C7orf66A4D0T2 115 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 BLACEA4D250 179 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 POM121BA6NF01 834 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 A6NIZ1 184 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR2AT4A6NND4 320 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRR23D1E9PI22 279 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 BLOC1S5-TXNDC5H3BN57 136 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MKRN2OSH3BPM6 223 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 K7ERI5 159 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 K7ESM1 405 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 AP4M1O00189 453 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 DFFAO00273 331 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 CYR61O00622 381 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 CYB561D2O14569 222 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRMT5O14744 637 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 DSCR3O14972 297 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 INPP4BO15327 924 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MID1O15344 667 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 INSIG1O15503 277 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC28A2O43868 658 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 GMFGO60234 142 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PCDHGA12O60330 932 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SCN2BO60939 215 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 CREG1O75629 220 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 CLIC3O95833 236 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 LATS1O95835 1130 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 AK1P00568 194 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 IFNB1P01574 187 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 IL1AP01583 271 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MT-ND1P03886 318 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MT-ND4LP03901 98 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 NMBP08949 121 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRR23D2P0DMB1 279 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SPP1P10451 314 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC2A2P11168 524 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 INSRRP14616 1297 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PPP3CBP16298 524 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms