RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 UBL7Q96S82 380 aaPredicted RBP3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PKP4Q99569 1192 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 KCNS3Q9BQ31 491 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CLSTN3Q9BQT9 956 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TMEM246Q9BRR3 403 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TTYH2Q9BSA4 534 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 C1QTNF7Q9BXJ2 289 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ALOXE3Q9BYJ1 711 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC6A16Q9GZN6 736 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MCOLN1Q9GZU1 580 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RNF38Q9H0F5 515 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CLEC4MQ9H2X3 399 aaPredicted RBP3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TP63Q9H3D4 680 aaPredicted RBP3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 FN3KQ9H479 309 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SERHL2Q9H4I8 314 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TRIM39Q9HCM9 518 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 HHATLQ9HCP6 504 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 HMX1Q9NP08 348 aaPredicted RBP3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LTB4R2Q9NPC1 389 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 C11orf16Q9NQ32 467 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 POLE4Q9NR33 117 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PLSCR2Q9NRY7 297 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GKN1Q9NS71 199 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SNTG1Q9NSN8 517 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SACM1LQ9NTJ5 587 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TXNL4BQ9NX01 149 aaKnown RBP3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LYARQ9NX58 379 aaKnown RBP3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PAQR5Q9NXK6 330 aaPredicted RBP3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SAGE1Q9NXZ1 904 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ACSL5Q9ULC5 683 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TBC1D24Q9ULP9 559 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CLCA2Q9UQC9 943 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ASF1AQ9Y294 204 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TMEM98Q9Y2Y6 226 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 N6AMT1Q9Y5N5 214 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 HEBP2Q9Y5Z4 205 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ACTL7AQ9Y615 435 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SPIN1Q9Y657 262 aaPredicted RBP3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MRPL42Q9Y6G3 142 aaKnown RBP3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RNF215Q9Y6U7 377 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 V9GYH0 126 aa3.2□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LRRK1Q38SD2 2015 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PRAMEF33A0A0G2JMD5 474 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 EDDM13A0A1B0GTR0 161 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ANKRD34BA5PLL1 514 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NAP1L6A6NFF2 107 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC22A31A6NKX4 558 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 KDM4EB2RXH2 506 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 B4DXG7 233 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 B8ZZF3 427 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ANHXE9PGG2 379 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NEDD8-MDP1E9PL57 170 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 K7ERQ8 282 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LEFTY2O00292 366 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PCDH17O14917 1159 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TFECO14948 347 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NPC1O15118 1278 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NDUFS4O43181 175 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 BNIP3LO60238 219 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GREM1O60565 184 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 FMO6PO60774 539 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PRAMEF10O60809 474 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF821O75541 412 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LEFTY1O75610 366 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GPX5O75715 221 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ARL6IP5O75915 188 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 UBXN7O94888 489 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CDRT1O95170 752 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR5F1O95221 314 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PRAMEF12O95522 483 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ECDO95905 644 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GASTP01350 101 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 IFNA7P01567 189 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 IFNGP01579 166 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 IGHA1P01876 353 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MT-ND5P03915 603 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CYP17A1P05093 508 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 KLK1P06870 262 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 IL3P08700 152 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 POU2F2P09086 479 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 HNRNPA1P09651 372 aaKnown RBP eCLIP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NUDT7P0C024 238 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CCNYL3P0C7X3 344 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SAGP10523 405 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PSKH1P11801 424 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ANXA3P12429 323 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TYRP14679 529 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NPPBP16860 134 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF8P17098 575 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 BMP7P18075 431 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CD22P20273 847 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TCEA1P23193 301 aaKnown RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 STOMP27105 288 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NDUFS1P28331 727 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TEAD1P28347 426 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 EPHA2P29317 976 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 HTR1FP30939 366 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CD70P32970 193 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 FAUP35544 74 aaKnown RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 AHRP35869 848 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms