RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 CWH43Q9H720 699 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 CD248Q9HCU0 757 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 SNX15Q9NRS6 342 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 TLR6Q9Y2C9 796 aa8.54□□□□□ -1.04
VCAN-208ENST00000512590 A0A0G2JLL6 359 aaPredicted RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 ATXN7O15265 892 aaPredicted RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 OR4F21O95013 312 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 SERPINE2P07093 398 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 TRIM23P36406 574 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 VIPR2P41587 438 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 GATMP50440 423 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 SSR4P51571 173 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 CAMK2BQ13554 666 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 CNN3Q15417 329 aaKnown RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 MLF2Q15773 248 aaPredicted RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 DCAF12L1Q5VU92 463 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 LPCAT4Q643R3 524 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 OVCH1Q7RTY7 1134 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 PRRT2Q7Z6L0 340 aaPredicted RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 PHTF2Q8N3S3 785 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 BORCS5Q969J3 196 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 RBM4BQ9BQ04 359 aaKnown RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 RBM4Q9BWF3 364 aaKnown RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 SLC17A9Q9BYT1 436 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 NLGN3Q9NZ94 848 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 TMA7Q9Y2S6 64 aaKnown RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 SNX10Q9Y5X0 201 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 FAM230AA0A1W2PPH8 454 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 WTIPA6NIX2 430 aaPredicted RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 NARSO43776 548 aaKnown RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 PORP16435 677 aaPredicted RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 NFYBP25208 207 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 PRSS12P56730 875 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 ANKDD1AQ495B1 522 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 FBXO48Q5FWF7 155 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 STEAP4Q687X5 459 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 C6orf15Q6UXA7 325 aaPredicted RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 UNC5DQ6UXZ4 953 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 MOB3CQ70IA8 216 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 SPPL2CQ8IUH8 684 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.53□□□□□ -1.04
VCAN-208ENST00000512590 OR1J4Q8NGS1 313 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 ADIPOR1Q96A54 375 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 IGSF21Q96ID5 467 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 TTTY10Q9BZA0 68 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 SEMA4CQ9C0C4 833 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 ARRDC1-AS1Q9H2J1 176 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 SMCO4Q9NRQ5 59 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 UCKL1Q9NWZ5 548 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 ETAA1Q9NY74 926 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 VPS29Q9UBQ0 182 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 MLXQ9UH92 298 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 SLC6A14Q9UN76 642 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 GOLT1BQ9Y3E0 138 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 M0R1B8 84 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 DPM1O60762 260 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 SLC43A1O75387 559 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 L1CAMP32004 1257 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 ST3GAL1Q11201 340 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 KCNC3Q14003 757 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 DEFB134Q4QY38 66 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 TMIGD1Q6UXZ0 262 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 ARHGAP22Q7Z5H3 698 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 NR4A3Q92570 626 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 KIAA1191Q96A73 305 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 S100A16Q96FQ6 103 aaKnown RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 P2RY11Q96G91 374 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 KATNB1Q9BVA0 655 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 HOXD1Q9GZZ0 328 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 PROCRQ9UNN8 238 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 VDAC3Q9Y277 283 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 PRELID3BQ9Y3B1 194 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 EML1O00423 815 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 SSX4O60224 188 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 DFNA5O60443 496 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 ENTPD6O75354 484 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 ZFAND5O76080 213 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 MMP2P08253 660 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 ATF6P18850 670 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 PTNP21246 168 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 CSN1S1P47710 185 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 DCDC1P59894 354 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 C11orf91Q3C1V1 193 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 ZBED5Q49AG3 693 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 LIN52Q52LA3 116 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 TRIM74Q86UV6 250 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 MKXQ8IYA7 352 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 BRI3BPQ8WY22 251 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 DGCR14Q96DF8 476 aaKnown RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 OR14A2Q96R54 314 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 BOCQ9BWV1 1114 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 C12orf49Q9H741 205 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 SRRM3A6NNA2 597 aaPredicted RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 TOR1BO14657 336 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 LYPLA1O75608 230 aaPredicted RBP8.53□□□□□ -1.04
VCAN-208ENST00000512590 CH25HO95992 272 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 GNAO1P09471 354 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 FXYD4P59646 89 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 ERV3-1Q14264 604 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 AWAT2Q6E213 333 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms