RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 PPP1CAP62136 330 aa20.89■□□□□ 0.93
RNF4-207ENST00000506706 LTB4RQ15722 352 aa20.89■□□□□ 0.93
RNF4-207ENST00000506706 COLEC12Q5KU26 742 aa20.89■□□□□ 0.93
RNF4-207ENST00000506706 SPARTQ8N0X7 666 aa20.89■□□□□ 0.93
RNF4-207ENST00000506706 SGCDQ92629 289 aa20.89■□□□□ 0.93
RNF4-207ENST00000506706 KAT2AQ92830 837 aa20.89■□□□□ 0.93
RNF4-207ENST00000506706 SHDQ96IW2 340 aa20.89■□□□□ 0.93
RNF4-207ENST00000506706 CSF3RQ99062 836 aa20.89■□□□□ 0.93
RNF4-207ENST00000506706 CHRDQ9H2X0 955 aa20.89■□□□□ 0.93
RNF4-207ENST00000506706 SEMA6CQ9H3T2 930 aa20.89■□□□□ 0.93
RNF4-207ENST00000506706 RHCGQ9UBD6 479 aa20.89■□□□□ 0.93
RNF4-207ENST00000506706 FBXL21Q9UKT6 434 aa20.89■□□□□ 0.93
RNF4-207ENST00000506706 POMT2Q9UKY4 750 aa20.89■□□□□ 0.93
RNF4-207ENST00000506706 A0A0G2JPF8 293 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 A0A1W2PPC1 479 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 HNRNPCL2B2RXH8 293 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 HNRNPCL3B7ZW38 293 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 ASNA1O43681 348 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 CHRM4P08173 479 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 HNRNPCL4P0DMR1 293 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 MAD2L1BPQ15013 274 aaPredicted RBP20.88■□□□□ 0.93
RNF4-207ENST00000506706 ELOCQ15369 112 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 GPAT3Q53EU6 434 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 PRAMEF8Q5VWM4 474 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 PRAMEF7Q5VXH5 474 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 GPR153Q6NV75 609 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 CSNK1A1LQ8N752 337 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 OR9Q2Q8NGE9 314 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 ZFAND2BQ8WV99 257 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 MPP4Q96JB8 637 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 OR7D2Q96RA2 312 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 NIPSNAP1Q9BPW8 284 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 BTBD2Q9BX70 525 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 PCED1AQ9H1Q7 454 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 FANCEQ9HB96 536 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 MRPS2Q9Y399 296 aaKnown RBP20.88■□□□□ 0.93
RNF4-207ENST00000506706 SNX5Q9Y5X3 404 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 SPACA6W5XKT8 324 aa20.88■□□□□ 0.93
RNF4-207ENST00000506706 A0A1W2PR77 199 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 ARRDC5A6NEK1 342 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 PTGES3LE9PB15 166 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 ZNF701M0R085 212 aaPredicted RBP20.87■□□□□ 0.93
RNF4-207ENST00000506706 FFAR1O14842 300 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 DNAJB6O75190 326 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 NME1P15531 152 aaKnown RBP20.87■□□□□ 0.93
RNF4-207ENST00000506706 SLC5A2P31639 672 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 OLR1P78380 273 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 SIM1P81133 766 aaPredicted RBP20.87■□□□□ 0.93
RNF4-207ENST00000506706 FUT5Q11128 374 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 TCTN3Q6NUS6 607 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 ZNF438Q7Z4V0 828 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 B3GNT8Q7Z7M8 397 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 CADM4Q8NFZ8 388 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 VANGL1Q8TAA9 524 aaPredicted RBP20.87■□□□□ 0.93
RNF4-207ENST00000506706 COL26A1Q96A83 441 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 CCDC3Q9BQI4 270 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 EQTNQ9NQ60 294 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 WNT16Q9UBV4 365 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 TPRKBQ9Y3C4 175 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 IL9P15248 144 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 FMO3P31513 532 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 IQCHQ86VS3 1027 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 CCDC71Q8IV32 467 aaPredicted RBP20.87■□□□□ 0.93
RNF4-207ENST00000506706 AVL9Q8NBF6 648 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 NODALQ96S42 347 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 NELL2Q99435 816 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 ACTRT3Q9BYD9 372 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 ANKRA2Q9H9E1 313 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 SCN3BQ9NY72 215 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 PCDHGA6Q9Y5G7 932 aa20.87■□□□□ 0.93
RNF4-207ENST00000506706 ZNF860A6NHJ4 632 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 XPNPEP2O43895 674 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 HTR1AP08908 422 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 MAZP56270 477 aaKnown RBP20.86■□□□□ 0.93
RNF4-207ENST00000506706 VSX2P58304 361 aaPredicted RBP20.86■□□□□ 0.93
RNF4-207ENST00000506706 RACK1P63244 317 aaKnown RBP20.86■□□□□ 0.93
RNF4-207ENST00000506706 XAF1Q6GPH4 301 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 DEF8Q6ZN54 512 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 USP53Q70EK8 1073 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 GKN2Q86XP6 184 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 GJD3Q8N144 294 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 OR4D11Q8NGI4 311 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 ISOC1Q96CN7 298 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 CNDP2Q96KP4 475 aaKnown RBP20.86■□□□□ 0.93
RNF4-207ENST00000506706 NMNAT1Q9HAN9 279 aaPredicted RBP20.86■□□□□ 0.93
RNF4-207ENST00000506706 DNAAF2Q9NVR5 837 aaKnown RBP20.86■□□□□ 0.93
RNF4-207ENST00000506706 PAK1IP1Q9NWT1 392 aaPredicted RBP20.86■□□□□ 0.93
RNF4-207ENST00000506706 NTMQ9P121 344 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 DOLKQ9UPQ8 538 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 LIPT1Q9Y234 373 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 KCNE3Q9Y6H6 103 aa20.86■□□□□ 0.93
RNF4-207ENST00000506706 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.85■□□□□ 0.93
RNF4-207ENST00000506706 ST6GAL1P15907 406 aa20.85■□□□□ 0.93
RNF4-207ENST00000506706 FUT4P22083 530 aa20.85■□□□□ 0.93
RNF4-207ENST00000506706 CBLP22681 906 aa20.85■□□□□ 0.93
RNF4-207ENST00000506706 MAN2A2P49641 1150 aa20.85■□□□□ 0.93
RNF4-207ENST00000506706 PROX2Q3B8N5 592 aa20.85■□□□□ 0.93
RNF4-207ENST00000506706 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.85■□□□□ 0.93
RNF4-207ENST00000506706 OLIG3Q7RTU3 272 aa20.85■□□□□ 0.93
RNF4-207ENST00000506706 PRSS41Q7RTY9 318 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms