RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 PTPN6P29350 595 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 SSTR4P31391 388 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 CASP2P42575 452 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 HNRNPH2P55795 449 aaKnown RBP12.69□□□□□ -0.38
CCDC58-207ENST00000498466 CBLBQ13191 982 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 DDX39BQ13838 428 aaKnown RBP12.69□□□□□ -0.38
CCDC58-207ENST00000498466 DEPDC1Q5TB30 811 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 TIGD3Q6B0B8 471 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 PLXDC2Q6UX71 529 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 ANGPTL8Q6UXH0 198 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 PRR22Q8IZ63 422 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 ZNF441Q8N8Z8 693 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 OR1J4Q8NGS1 313 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 RGMAQ96B86 450 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 PIK3IP1Q96FE7 263 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 PBKQ96KB5 322 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 CENPKQ9BS16 269 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 METTL7AQ9H8H3 244 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 POPDC3Q9HBV1 291 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 KLHL28Q9NXS3 571 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 ZNF226Q9NYT6 803 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 CD274Q9NZQ7 290 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 PACSIN3Q9UKS6 424 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 NINQ8N4C6 2090 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 GOLGA6L10A0A0M3HER8 536 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 GLOD5A6NK44 160 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 WASHC1A8K0Z3 465 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 DEFB108AA8MXU0 73 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 SNPHO15079 494 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 SIAH2O43255 324 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 CNOT4O95628 575 aaKnown RBP12.68□□□□□ -0.38
CCDC58-207ENST00000498466 S100BP04271 92 aaPredicted RBP12.68□□□□□ -0.38
CCDC58-207ENST00000498466 KRT15P19012 456 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 CDC25BP30305 580 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 SERPINB1P30740 379 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 RPS13P62277 151 aaKnown RBP12.68□□□□□ -0.38
CCDC58-207ENST00000498466 EEF1A1P68104 462 aaKnown RBP12.68□□□□□ -0.38
CCDC58-207ENST00000498466 MGAT5Q09328 741 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 GAB1Q13480 694 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 KBTBD12Q3ZCT8 623 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 CDKL4Q5MAI5 379 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 EEF1A1P5Q5VTE0 462 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 STEAP4Q687X5 459 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 ENPP6Q6UWR7 440 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 LAS2Q8IYD9 372 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 ZCCHC7Q8N3Z6 543 aaKnown RBP12.68□□□□□ -0.38
CCDC58-207ENST00000498466 RNF175Q8N4F7 328 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 OR7G3Q8NG95 312 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 EXT2Q93063 718 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 WNT2BQ93097 391 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 WFIKKN1Q96NZ8 548 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 FETUBQ9UGM5 382 aa12.68□□□□□ -0.38
CCDC58-207ENST00000498466 PTBP2Q9UKA9 531 aaKnown RBP12.68□□□□□ -0.38
CCDC58-207ENST00000498466 PLPP1O14494 284 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 CDH16O75309 829 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 SMNDC1O75940 238 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCDC58-207ENST00000498466 SLC35E2BP0CK96 405 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 SLC35E2P0CK97 266 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 CCDC166P0CW27 439 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 NR2F6P10588 404 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 ABCD3P28288 659 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 GALNSP34059 522 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 MC3RP41968 323 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 FAM27E3Q08E93 113 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 FRG1Q14331 258 aaKnown RBP12.67□□□□□ -0.38
CCDC58-207ENST00000498466 OR4D1Q15615 310 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 SCIMPQ6UWF3 145 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 C20orf204Q6ZNR8 217 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 LRRC70Q7Z2Q7 622 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 ANKMY2Q8IV38 441 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 PDPRQ8NCN5 879 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 OR14L1PQ8NHC6 308 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 LRRC39Q96DD0 335 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 FAM111AQ96PZ2 611 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 MED18Q9BUE0 208 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 CD244Q9BZW8 370 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 RHOJQ9H4E5 214 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 CAB39LQ9H9S4 337 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 WDR41Q9HAD4 459 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 MAPRE3Q9UPY8 281 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 TEX264Q9Y6I9 313 aa12.67□□□□□ -0.38
CCDC58-207ENST00000498466 ANK3Q12955 4377 aaKnown RBP12.67□□□□□ -0.38
CCDC58-207ENST00000498466 A0A1W2PR48 441 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 C2orf72A6NCS6 295 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 MSTNO14793 375 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 CRLF1O75462 422 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 CD1DP15813 335 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 POU4F1Q01851 419 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 E2F2Q14209 437 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 CYP20A1Q6UW02 462 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 ADGRE4PQ86SQ3 457 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 GRAMD2AQ8IUY3 354 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 TRIM42Q8IWZ5 723 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 GALNT12Q8IXK2 581 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 HUS1BQ8NHY5 278 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 PPP1R14CQ8TAE6 165 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 RDH11Q8TC12 318 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 UCN3Q969E3 161 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 ADIPOR1Q96A54 375 aa12.66□□□□□ -0.38
CCDC58-207ENST00000498466 UCN2Q96RP3 112 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms