RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 TP53INP1Q96A56 240 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 MTBPQ96DY7 904 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 SPOCK3Q9BQ16 436 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 UCK2Q9BZX2 261 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 ENKD1Q9H0I2 346 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 ZNF703Q9H7S9 590 aaPredicted RBP8.97□□□□□ -0.97
UFD1-210ENST00000494054 BRF2Q9HAW0 419 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 ZFP64Q9NPA5 681 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 COQ3Q9NZJ6 369 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 CNIH4Q9P003 139 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 SPRR3Q9UBC9 169 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 SNX6Q9UNH7 406 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 DTX4Q9Y2E6 619 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 FAM215AQ9Y5M1 114 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 FBN2P35556 2912 aa8.97□□□□□ -0.97
UFD1-210ENST00000494054 TRGV5A0A0B4J1U4 118 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 A0A1W2PPM1 405 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 NKX2-6A6NCS4 301 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 OR14I1A6ND48 311 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 AQP7O14520 342 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 BCKDKO14874 412 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 TRIM3O75382 744 aaPredicted RBP8.96□□□□□ -0.98
UFD1-210ENST00000494054 ERAL1O75616 437 aaKnown RBP8.96□□□□□ -0.98
UFD1-210ENST00000494054 GLI4P10075 376 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 PYGBP11216 843 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 GPX3P22352 226 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 ATP5F1P24539 256 aaPredicted RBP8.96□□□□□ -0.98
UFD1-210ENST00000494054 ACVR2AP27037 513 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 MAN2A2P49641 1150 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 PRKAA2P54646 552 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 KRTAP10-9P60411 292 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 RAE1P78406 368 aaKnown RBP8.96□□□□□ -0.98
UFD1-210ENST00000494054 MAP4K2Q12851 820 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 EXOSC7Q15024 291 aaKnown RBP8.96□□□□□ -0.98
UFD1-210ENST00000494054 PRICKLE4Q2TBC4 344 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 HLA-DQA1Q5Y7H0 255 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 DESI1Q6ICB0 168 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 GPRIN3Q6ZVF9 776 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 DND1Q8IYX4 353 aaKnown RBP8.96□□□□□ -0.98
UFD1-210ENST00000494054 PRR22Q8IZ63 422 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 LRRC25Q8N386 305 aaPredicted RBP8.96□□□□□ -0.98
UFD1-210ENST00000494054 ADCY4Q8NFM4 1077 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 SPPL2AQ8TCT8 520 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 RND1Q92730 232 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 DIO2Q92813 273 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 CNRIP1Q96F85 164 aaPredicted RBP8.96□□□□□ -0.98
UFD1-210ENST00000494054 JSRP1Q96MG2 331 aaPredicted RBP8.96□□□□□ -0.98
UFD1-210ENST00000494054 ZNF681Q96N22 645 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 ZNF382Q96SR6 550 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 TREX2Q9BQ50 279 aaPredicted RBP8.96□□□□□ -0.98
UFD1-210ENST00000494054 NXF5Q9H1B4 397 aaKnown RBP8.96□□□□□ -0.98
UFD1-210ENST00000494054 SLC6A15Q9H2J7 730 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 LDAHQ9H6V9 325 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 NPDC1Q9NQX5 325 aaPredicted RBP8.96□□□□□ -0.98
UFD1-210ENST00000494054 MAT2BQ9NZL9 334 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 HEY2Q9UBP5 337 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 VPS29Q9UBQ0 182 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 TBK1Q9UHD2 729 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 ZNF639Q9UID6 485 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 EMCNQ9ULC0 261 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 BOKQ9UMX3 212 aaPredicted RBP8.96□□□□□ -0.98
UFD1-210ENST00000494054 TIMM22Q9Y584 194 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 NPFFR2Q9Y5X5 522 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 POLQO75417 2590 aa8.96□□□□□ -0.98
UFD1-210ENST00000494054 NCKAP5O14513 1909 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 PDZD2O15018 2839 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 NINQ8N4C6 2090 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 ANKRD33BA6NCL7 494 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 FAM90A27PA6NNH2 459 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 ENO4A6NNW6 628 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 UBFD1O14562 309 aaKnown RBP8.95□□□□□ -0.98
UFD1-210ENST00000494054 SUSD5O60279 629 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 HCN1O60741 890 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 GUCY1B2O75343 617 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 NME6O75414 186 aaPredicted RBP8.95□□□□□ -0.98
UFD1-210ENST00000494054 TOXO94900 526 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 CBX7O95931 251 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 KRT6AP02538 564 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 KRT6BP04259 564 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 SHBGP04278 402 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 CSNK2A2P19784 350 aaPredicted RBP8.95□□□□□ -0.98
UFD1-210ENST00000494054 CHRNB4P30926 498 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 DEKP35659 375 aaKnown RBP8.95□□□□□ -0.98
UFD1-210ENST00000494054 KRT6CP48668 564 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 TRPC1P48995 793 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 HMGCS1Q01581 520 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 TFF3Q07654 80 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 RASA2Q15283 850 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 RPS6KA2Q15349 733 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 LTB4RQ15722 352 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 NNATQ16517 81 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 TRMT12Q53H54 448 aaKnown RBP8.95□□□□□ -0.98
UFD1-210ENST00000494054 FNDC7Q5VTL7 733 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 SCIMPQ6UWF3 145 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 MEX3BQ6ZN04 569 aaKnown RBP8.95□□□□□ -0.98
UFD1-210ENST00000494054 SH2D5Q6ZV89 423 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 ACAD11Q709F0 780 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 LCA5Q86VQ0 697 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 LIX1LQ8IVB5 337 aa8.95□□□□□ -0.98
UFD1-210ENST00000494054 OR7G1Q8NGA0 311 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms