RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 CFL2Q9Y281 166 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 NOSIPQ9Y314 301 aaKnown RBP13.03□□□□□ -0.32
VCP-207ENST00000493886 COLEC10Q9Y6Z7 277 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 DRD1P21728 446 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 LRRC32Q14392 662 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 NFATC4Q14934 902 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 KCNJ8Q15842 424 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 NDUFA5Q16718 116 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 SPDYE7PQ495Y7 208 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 SYT6Q5T7P8 510 aaPredicted RBP13.03□□□□□ -0.32
VCP-207ENST00000493886 SLC22A16Q86VW1 577 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 GEMIN6Q8WXD5 167 aaKnown RBP13.03□□□□□ -0.32
VCP-207ENST00000493886 MSLNLQ96KJ4 702 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 DACH2Q96NX9 599 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 GDF15Q99988 308 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 COPS4Q9BT78 406 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 THSD1Q9NS62 852 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 TAS2R16Q9NYV7 291 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 CRNNQ9UBG3 495 aaPredicted RBP13.03□□□□□ -0.32
VCP-207ENST00000493886 SPEF1Q9Y4P9 236 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 HSPE1-MOB4S4R3N1 261 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 SZT2Q5T011 3432 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 SNTNA6NMZ2 147 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 PRAMEF10O60809 474 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 EML2O95834 649 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 JUNDP17535 347 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 AK4P27144 223 aaPredicted RBP13.02□□□□□ -0.32
VCP-207ENST00000493886 ACSL1P33121 698 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 SERPINB10P48595 397 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 MRPS21P82921 87 aaKnown RBP13.02□□□□□ -0.32
VCP-207ENST00000493886 HYAL2Q12891 473 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 TPRG1LQ5T0D9 272 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 NDUFAF5Q5TEU4 345 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 REEP3Q6NUK4 255 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 RD3Q7Z3Z2 195 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 C6orf120Q7Z4R8 191 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 DENND6BQ8NEG7 585 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 MCFD2Q8NI22 146 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 UTP15Q8TED0 518 aaKnown RBP13.02□□□□□ -0.32
VCP-207ENST00000493886 DCSTAMPQ9H295 470 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 ACSS1Q9NUB1 689 aaPredicted RBP13.02□□□□□ -0.32
VCP-207ENST00000493886 TAS2R7Q9NYW3 318 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 RNF6Q9Y252 685 aa13.02□□□□□ -0.32
VCP-207ENST00000493886 ERI3O43414 337 aaKnown RBP13.02□□□□□ -0.33
VCP-207ENST00000493886 B4GALT2O60909 372 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 HSMCR30P0CW71 290 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 DRD2P14416 443 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 ITGA2P17301 1181 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 CMPK1P30085 196 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 TGFBR2P37173 567 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 SPIBQ01892 262 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 ARMC8Q8IUR7 673 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 LURAP1LQ8IV03 231 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 MS4A6EQ96DS6 147 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 WDR92Q96MX6 357 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 FEVQ99581 238 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 SLIRPQ9GZT3 109 aaKnown RBP13.02□□□□□ -0.33
VCP-207ENST00000493886 NECTIN3Q9NQS3 549 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 PCDHGB1Q9Y5G3 927 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 PCDHGA6Q9Y5G7 932 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 USP34Q70CQ2 3546 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 ISM1B1AKI9 464 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 C4orf51C9J302 202 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 C5orf58C9J3I9 102 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 CNOT3O75175 753 aaKnown RBP13.02□□□□□ -0.33
VCP-207ENST00000493886 NDUFV2P19404 249 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 AHRP35869 848 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 CDH12P55289 794 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 RAB15P59190 212 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 MRPL28Q13084 256 aaKnown RBP13.02□□□□□ -0.33
VCP-207ENST00000493886 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 ZNF600Q6ZNG1 722 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 TBC1D19Q8N5T2 526 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 OR4E2Q8NGC2 313 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 SLC38A5Q8WUX1 472 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 LCN9Q8WX39 176 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 TSACCQ96A04 125 aaPredicted RBP13.02□□□□□ -0.33
VCP-207ENST00000493886 BMFQ96LC9 184 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 NECTIN4Q96NY8 510 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 FAIM2Q9BWQ8 316 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 KLHL25Q9H0H3 589 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 A4GALTQ9NPC4 353 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 GPR83Q9NYM4 423 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 SLC6A14Q9UN76 642 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 KLHL20Q9Y2M5 609 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 DNAH14Q0VDD8 3507 aa13.02□□□□□ -0.33
VCP-207ENST00000493886 OR2A25A4D2G3 310 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 TBX1O43435 398 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 BCHEP06276 602 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 GADD45AP24522 165 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 ACVR2AP27037 513 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 CCT3P49368 545 aaKnown RBP13.01□□□□□ -0.33
VCP-207ENST00000493886 SLC9A5Q14940 896 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 MLC1Q15049 377 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 RPS26P11Q5JNZ5 115 aaPredicted RBP13.01□□□□□ -0.33
VCP-207ENST00000493886 TSPYL5Q86VY4 417 aaPredicted RBP13.01□□□□□ -0.33
VCP-207ENST00000493886 AMIGO1Q86WK6 493 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 CCDC103Q8IW40 242 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 NLGN4XQ8N0W4 816 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 SVOPQ8N4V2 548 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms