RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 ENO3P13929 434 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 OGNP20774 298 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 BMP5P22003 454 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 JAK1P23458 1154 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 NPY2RP49146 381 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 GPR143P51810 404 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 ITGA8P53708 1063 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 DLX5P56178 289 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 SKP1P63208 163 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 CDK16Q00536 496 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 FOXD4Q12950 439 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 RAB39AQ14964 217 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 HERC3Q15034 1050 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 SPA17Q15506 151 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 HYAL4Q2M3T9 481 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 KLHL38Q2WGJ6 581 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 FBXL19-AS1Q494R0 122 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 ACSBG2Q5FVE4 666 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 MRNIPQ6NTE8 343 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 AADACL2Q6P093 401 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 C4orf22Q6V702 233 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 PPP1R21Q6ZMI0 780 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 CYHR1Q6ZMK1 362 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 C3P1Q6ZMU1 363 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 QSOX2Q6ZRP7 698 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 CAMKMTQ7Z624 323 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 SDCCAG8Q86SQ7 713 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 BIVMQ86UB2 503 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 GPALPP1Q8IXQ4 340 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 CAMKVQ8NCB2 501 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 APCDD1LQ8NCL9 501 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 PPHLN1Q8NEY8 458 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 ABHD11Q8NFV4 315 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 OR4K1Q8NGD4 311 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 SKA2Q8WVK7 121 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 KCNJ9Q92806 393 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 TMEM125Q96AQ2 219 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 TBC1D20Q96BZ9 403 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 Q96MF0 132 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 PRAP1Q96NZ9 151 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 VRK1Q99986 396 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 UCK2Q9BZX2 261 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 BRINP2Q9C0B6 783 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 CDCP1Q9H5V8 836 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 UNKLQ9H9P5 680 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 ANKHQ9HCJ1 492 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 RASSF1Q9NS23 344 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 INTS10Q9NVR2 710 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 SLC45A2Q9UMX9 530 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 DRG1Q9Y295 367 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 R3HDM2Q9Y2K5 976 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 MED16Q9Y2X0 877 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 MTO1Q9Y2Z2 717 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 TNFRSF18Q9Y5U5 241 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 ATRQ13535 2644 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 CSPG4Q6UVK1 2322 aa4.72□□□□□ -1.65
R3HDM1-218ENST00000487294 VPS13CQ709C8 3753 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 NKX2-6A6NCS4 301 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 SYNDIG1LA6NDD5 238 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 OR2W5A6NFC9 320 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 SAGE2PA6NJ88 616 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 USP27XA6NNY8 438 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 E7EVH7 732 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 SGK494L7N484 410 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 FCHO1O14526 889 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 BCKDKO14874 412 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 TFECO14948 347 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 ZNHIT1O43257 154 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 PROM1O43490 865 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 ZBTB14O43829 449 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 PEX1O43933 1283 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 HS6ST1O60243 411 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 LCMT2O60294 686 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 SLC43A1O75387 559 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 RDH16O75452 317 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 ERN1O75460 977 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 GLSO94925 669 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 ZWINTO95229 277 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 GOSR1O95249 250 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 TUBB4AP04350 444 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 TPOP07202 933 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 APRTP07741 180 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 SLC35G6P0C7Q6 338 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 ALOX12P18054 663 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 IL1RNP18510 177 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 CHRM3P20309 590 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 ACVR2AP27037 513 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 NMBRP28336 390 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 IMPA1P29218 277 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 CYLC1P35663 651 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 ZFP36L2P47974 494 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 EIF3BP55884 814 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 NUP107P57740 925 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 OR4D2P58180 307 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 BLOC1S1P78537 153 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 ACTN3Q08043 901 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 PMPCAQ10713 525 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 MYBPHQ13203 477 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 KCNJ11Q14654 390 aa4.71□□□□□ -1.66
R3HDM1-218ENST00000487294 DAZAP2Q15038 168 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms