RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 CD244Q9BZW8 370 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 CXorf21Q9HAI6 301 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 DTX4Q9Y2E6 619 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 ARID1AO14497 2285 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 NBEAL1Q6ZS30 2694 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 OR6C76A6NM76 312 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 CXorf49A8MYA2 514 aaPredicted RBP11.71□□□□□ -0.53
UBR4-213ENST00000483922 CCNT2O60583 730 aaKnown RBP11.71□□□□□ -0.53
UBR4-213ENST00000483922 TGM6O95932 706 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 CCDC166P0CW27 439 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 PCNAP12004 261 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 GALNSP34059 522 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 BSGP35613 385 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 STARP49675 285 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 PCDH1Q08174 1060 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 MGAT5Q09328 741 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 DLG1Q12959 904 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 TOMM20Q15388 145 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 PPP1R7Q15435 360 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 ACKR1Q16570 336 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 HIST2H2ACQ16777 129 aaPredicted RBP11.71□□□□□ -0.53
UBR4-213ENST00000483922 CDKL4Q5MAI5 379 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 HIST2H2AA3Q6FI13 130 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 SULT1C3Q6IMI6 304 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 ZNF474Q6S9Z5 364 aaPredicted RBP11.71□□□□□ -0.53
UBR4-213ENST00000483922 GCNT2Q8N0V5 402 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 ZCCHC7Q8N3Z6 543 aaKnown RBP11.71□□□□□ -0.53
UBR4-213ENST00000483922 WDSUB1Q8N9V3 476 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 LRRN4CLQ8ND94 238 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 PERPQ96FX8 193 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 CMTM7Q96FZ5 175 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 TMEM41AQ96HV5 264 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 VPS39Q96JC1 886 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 ART5Q96L15 291 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 UBXN10Q96LJ8 280 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 KRT12Q99456 494 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 SFXN3Q9BWM7 321 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 DDX47Q9H0S4 455 aaKnown RBP11.71□□□□□ -0.53
UBR4-213ENST00000483922 POPDC3Q9HBV1 291 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 CLCF1Q9UBD9 225 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 SPACA6W5XKT8 324 aa11.71□□□□□ -0.53
UBR4-213ENST00000483922 RAI1Q7Z5J4 1906 aaPredicted RBP11.7□□□□□ -0.54
UBR4-213ENST00000483922 A0A0A6YYD5 115 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 TP53I11O14683 189 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 ICOSLGO75144 302 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 ERN1O75460 977 aaKnown RBP11.7□□□□□ -0.54
UBR4-213ENST00000483922 ACTL6AO96019 429 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 SLC35E2BP0CK96 405 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 SLC35E2P0CK97 266 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 ABCD3P28288 659 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 GFRA1P56159 465 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 SRYQ05066 204 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 MGAT2Q10469 447 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 FUT7Q11130 342 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 PAGE2BQ5JRK9 111 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 MED27Q6P2C8 311 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 PACS2Q86VP3 889 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 TRIM42Q8IWZ5 723 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 TAGAPQ8N103 731 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 TCAIMQ8N3R3 496 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 HUS1BQ8NHY5 278 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 ACTRT1Q8TDG2 376 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 HGDQ93099 445 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 PIGTQ969N2 578 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 RGMAQ96B86 450 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 STARD4Q96DR4 205 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 SECISBP2Q96T21 854 aaKnown RBP11.7□□□□□ -0.54
UBR4-213ENST00000483922 MTERF1Q99551 399 aaKnown RBP11.7□□□□□ -0.54
UBR4-213ENST00000483922 BDH2Q9BUT1 245 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 NXF5Q9H1B4 397 aaKnown RBP11.7□□□□□ -0.54
UBR4-213ENST00000483922 RHOJQ9H4E5 214 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 GALNT9Q9HCQ5 603 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 SNX15Q9NRS6 342 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.7□□□□□ -0.544e-7■■■■■ 44
UBR4-213ENST00000483922 MS4A12Q9NXJ0 267 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 KLHL28Q9NXS3 571 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 CD274Q9NZQ7 290 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 ASIC3Q9UHC3 531 aa11.7□□□□□ -0.54
UBR4-213ENST00000483922 MED12LQ86YW9 2145 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 EXPH5Q8NEV8 1989 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 PGRMC1O00264 195 aaKnown RBP11.69□□□□□ -0.54
UBR4-213ENST00000483922 SNPHO15079 494 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 OR10H2O60403 315 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 AIFM1O95831 613 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 GBAP04062 536 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 CYP4B1P13584 511 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 MC3RP41968 323 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 MASP1P48740 699 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 RPS13P62277 151 aaKnown RBP11.69□□□□□ -0.54
UBR4-213ENST00000483922 DDX39BQ13838 428 aaKnown RBP11.69□□□□□ -0.54
UBR4-213ENST00000483922 SF3B4Q15427 424 aaKnown RBP eCLIP11.69□□□□□ -0.542e-8■■■■■ 28
UBR4-213ENST00000483922 ANGPTL8Q6UXH0 198 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 ISCA2Q86U28 154 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 PDIK1LQ8N165 341 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 FBXO36Q8NEA4 188 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 C7orf57Q8NEG2 295 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 OR1J4Q8NGS1 313 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 GRK7Q8WTQ7 553 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 WNT2BQ93097 391 aa11.69□□□□□ -0.54
UBR4-213ENST00000483922 OSBPL9Q96SU4 736 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms