RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 OGFOD3Q6PK18 319 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 SLC36A4Q6YBV0 504 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 Q7L0L9 218 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 PRSS41Q7RTY9 318 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 TSPYL5Q86VY4 417 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-225ENST00000483495 C19orf47Q8N9M1 422 aaKnown RBP12.44□□□□□ -0.42
CPNE1-225ENST00000483495 LMX1AQ8TE12 382 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 C16orf58Q96GQ5 468 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 DHRS1Q96LJ7 313 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 HSPA12BQ96MM6 686 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 GUCD1Q96NT3 240 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 FEVQ99581 238 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 SPATA5L1Q9BVQ7 753 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-225ENST00000483495 THEGQ9P2T0 379 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 SEC14L3Q9UDX4 400 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 ACAD8Q9UKU7 415 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 TRIOO75962 3097 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 LMO7DNF2Z398 122 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 FFAR1O14842 300 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 HCRTR1O43613 425 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 IFI6P09912 130 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 CCDC159P0C7I6 412 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 IL7RP16871 459 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 GSTT1P30711 240 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 VSX2P58304 361 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-225ENST00000483495 HNRNPKP61978 463 aaKnown RBP eCLIP12.44□□□□□ -0.42
CPNE1-225ENST00000483495 SIM1P81133 766 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-225ENST00000483495 CDK5R2Q13319 367 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 TCTN3Q6NUS6 607 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 GPR153Q6NV75 609 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 OR2L13Q8N349 312 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 SLC5A8Q8N695 610 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 OR7G2Q8NG99 324 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 OR52J3Q8NH60 311 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 DNASE2BQ8WZ79 361 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 TMIGD2Q96BF3 282 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 SPACA7Q96KW9 195 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 OR7D2Q96RA2 312 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 APOL4Q9BPW4 351 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 CCDC3Q9BQI4 270 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 YIPF4Q9BSR8 244 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 ACTRT3Q9BYD9 372 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 PTGFRNQ9P2B2 879 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 BLOC1S6Q9UL45 172 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 LIPT1Q9Y234 373 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 NAALAD2Q9Y3Q0 740 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 GMPPBQ9Y5P6 360 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 SPACA6W5XKT8 324 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 DSPPQ9NZW4 1301 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 K7ESF4 209 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 AQP9O43315 295 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 B4GAT1O43505 415 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 SEMA7AO75326 666 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 GADD45GO95257 159 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 CPMP14384 443 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 PORP16435 677 aaPredicted RBP12.43□□□□□ -0.42
CPNE1-225ENST00000483495 CDH3P22223 829 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 EPHA2P29317 976 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 SOX18P35713 384 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 CXCR4P61073 352 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 OLR1P78380 273 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 IL1RL1Q01638 556 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 PRTGQ2VWP7 1150 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 ZBED5Q49AG3 693 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 COLEC12Q5KU26 742 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 ALDH16A1Q8IZ83 802 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 CA13Q8N1Q1 262 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 DNAJC22Q8N4W6 341 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 KAT2AQ92830 837 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 HRASLS5Q96KN8 279 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 MS4A4EQ96PG1 132 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 TRNT1Q96Q11 434 aaKnown RBP12.43□□□□□ -0.42
CPNE1-225ENST00000483495 MIR1-1HGQ9H1L0 117 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 PAPOLBQ9NRJ5 636 aaKnown RBP12.43□□□□□ -0.42
CPNE1-225ENST00000483495 GIN1Q9NXP7 522 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 DOLKQ9UPQ8 538 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 POFUT2Q9Y2G5 429 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 HCN4Q9Y3Q4 1203 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 KCNE3Q9Y6H6 103 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 COMMD3-BMI1R4GMX3 469 aa12.43□□□□□ -0.42
CPNE1-225ENST00000483495 ZNF860A6NHJ4 632 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 H3BSA7 217 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 SLC1A7O00341 560 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 PCDH17O14917 1159 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 CASC3O15234 703 aaKnown RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 SRPX2O60687 465 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 SLITRK5O94991 958 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 CCNB2O95067 398 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 CPNE6O95741 557 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 ATP1B1P05026 303 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 PROS1P07225 676 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 CYP4B1P13584 511 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 JUNBP17275 347 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 AGXTP21549 392 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 BCKDHBP21953 392 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 CBLP22681 906 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 SH3BGRP55822 239 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-225ENST00000483495 ESRRGP62508 458 aa12.42□□□□□ -0.42
CPNE1-225ENST00000483495 RPP38P78345 283 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms