RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TSNAXQ99598 290 aaKnown RBP9.14□□□□□ -0.95
VEGFA-212ENST00000480614 HERPUD2Q9BSE4 406 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 MEAF6Q9HAF1 191 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 MPC1LP0DKB6 136 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 HTR1EP28566 365 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 UQCRC1P31930 480 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 NUDT6P53370 316 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 GPR17Q13304 367 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 TXNDC5Q8NBS9 432 aaKnown RBP9.14□□□□□ -0.95
VEGFA-212ENST00000480614 HSPBAP1Q96EW2 488 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 IGLV3-22A0A075B6J6 115 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 LATO43561 262 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 LIX1LQ8IVB5 337 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF689Q96CS4 500 aaPredicted RBP9.14□□□□□ -0.95
VEGFA-212ENST00000480614 MALSU1Q96EH3 234 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 ECM29Q5VYK3 1845 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 NAP1L6A6NFF2 107 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 A6NLC8 198 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 EIF3FO00303 357 aaPredicted RBP9.14□□□□□ -0.95
VEGFA-212ENST00000480614 KANK2Q63ZY3 851 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF461Q8TAF7 563 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 PPP1R35Q8TAP8 253 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 MMABQ96EY8 250 aaPredicted RBP9.14□□□□□ -0.95
VEGFA-212ENST00000480614 PKP2Q99959 881 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 SYT3Q9BQG1 590 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF850A8MQ14 1090 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 HOXC8P31273 242 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 BNIP3Q12983 259 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 FAM198BQ6UWH4 519 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 OR1F2PQ96R84 312 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 CLEC4EQ9ULY5 219 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 ERVK-19Q9WJR5 959 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 PRKCGP05129 697 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 CHMP24386 653 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 TXNDC8Q6A555 127 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 C1orf94Q6P1W5 598 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 SH3YL1Q96HL8 342 aaPredicted RBP9.14□□□□□ -0.95
VEGFA-212ENST00000480614 TMEM100Q9NV29 134 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 SSX4O60224 188 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 MRPS14O60783 128 aaKnown RBP9.14□□□□□ -0.95
VEGFA-212ENST00000480614 WDR4P57081 412 aaKnown RBP9.14□□□□□ -0.95
VEGFA-212ENST00000480614 RPS15P62841 145 aaKnown RBP9.14□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF33BQ06732 778 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 SGCAQ16586 387 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 CTC1Q2NKJ3 1217 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 GARNL3Q5VVW2 1013 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 DBF4BQ8NFT6 615 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF675Q8TD23 568 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 RNF128Q8TEB7 428 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 MYRFLQ96LU7 910 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 EVA1AQ9H8M9 152 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 ROS1P08922 2347 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 ITGB4P16144 1822 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 IGKV6D-41A0A0C4DH26 115 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 hCG_1807616A0A1W2PRN6 198 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 CENPBD1B2RD01 187 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF701M0R085 212 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 EEF1E1O43324 174 aaKnown RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ARHGEF15O94989 841 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 PGCP20142 388 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 LIPKQ5VXJ0 399 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 OR4K3Q96R72 315 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 PITX2Q99697 317 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 NANSQ9NR45 359 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 HRASLS2Q9NWW9 162 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ACSL6Q9UKU0 697 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 RNF11Q9Y3C5 154 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 COL1A1P02452 1464 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ODF4Q2M2E3 257 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 C6orf183Q5T699 404 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 CMTM1Q8IZ96 169 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 SNAPC3Q92966 411 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 SRA1Q9HD15 236 aaKnown RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 LOC102723532A0A0G2JNH3 316 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 TRAPPC13A5PLN9 417 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 PTCHD3Q3KNS1 767 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 RABEPKQ7Z6M1 372 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 PHIPQ8WWQ0 1821 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 OR14A2Q96R54 314 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ZDHHC2Q9UIJ5 367 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 GPR34Q9UPC5 381 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 CIB4A0PJX0 185 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 LEFTY2O00292 366 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ITM2AO43736 263 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 SIX3O95343 332 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 SOX14O95416 240 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 HACD2Q6Y1H2 254 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ABHD12BQ7Z5M8 362 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ZFAND4Q86XD8 727 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF280BQ86YH2 543 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 CPT1CQ8TCG5 803 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 P2RY13Q9BPV8 354 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 OR51B5Q9H339 312 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 FZD3Q9NPG1 666 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 GRXCR1A8MXD5 290 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 LUMP51884 338 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 SLAMF1Q13291 335 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 MAMDC2Q7Z304 686 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-212ENST00000480614 OR2T4Q8NH00 348 aa9.13□□□□□ -0.95
VEGFA-212ENST00000480614 ASB15Q8WXK1 588 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms