RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 METTL7AQ9H8H3 244 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 PROK2Q9HC23 129 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 TEX10Q9NXF1 929 aaPredicted RBP14.11□□□□□ -0.15
SKA3-204ENST00000462482 CRIM1Q9NZV1 1036 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 ST6GALNAC2Q9UJ37 374 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 TMCO1Q9UM00 188 aa14.11□□□□□ -0.15
SKA3-204ENST00000462482 GOLGA6L10A6NI86 522 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 A6NNC1 897 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 WASHC1A8K0Z3 465 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 PGRMC2O15173 223 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 DIAPH2O60879 1101 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 ACSL3O95573 720 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 GBAP04062 536 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 HPNP05981 417 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 CASQ1P31415 396 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 CEACAM8P31997 349 aaPredicted RBP14.1□□□□□ -0.15
SKA3-204ENST00000462482 XKP51811 444 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 CRYZQ08257 329 aaKnown RBP14.1□□□□□ -0.15
SKA3-204ENST00000462482 SNTB1Q13884 538 aaKnown RBP14.1□□□□□ -0.15
SKA3-204ENST00000462482 RCAN2Q14206 197 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 CEBPEQ15744 281 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 CCNYL2Q5T2Q4 361 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 ZNF441Q8N8Z8 693 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 TNIP2Q8NFZ5 429 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 WDR20Q8TBZ3 569 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 ZNF717Q9BY31 904 aaPredicted RBP14.1□□□□□ -0.15
SKA3-204ENST00000462482 VPS11Q9H270 941 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 NOL11Q9H8H0 719 aaKnown RBP14.1□□□□□ -0.15
SKA3-204ENST00000462482 ADAM29Q9UKF5 820 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 C15orf41Q9Y2V0 281 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 IKBKGQ9Y6K9 419 aa14.1□□□□□ -0.15
SKA3-204ENST00000462482 TUBAL3A6NHL2 446 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 LRRC14BA6NHZ5 514 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 SMIM24O75264 130 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 KLK1P06870 262 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 RBP1P09455 135 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 PORP16435 677 aaPredicted RBP14.09□□□□□ -0.15
SKA3-204ENST00000462482 OPRM1P35372 400 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 MAPK12P53778 367 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 FUT7Q11130 342 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 FBXL19-AS1Q494R0 122 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 NSUN5P2Q63ZY6 315 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 FRG2Q64ET8 278 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 TAOK1Q7L7X3 1001 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 CDC20BQ86Y33 519 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 TGIF2LYQ8IUE0 185 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 PTGR2Q8N8N7 351 aaPredicted RBP14.09□□□□□ -0.15
SKA3-204ENST00000462482 RELL2Q8NC24 303 aaPredicted RBP14.09□□□□□ -0.15
SKA3-204ENST00000462482 C17orf47Q8NEP4 570 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 OR1J4Q8NGS1 313 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 ABTB1Q969K4 478 aaPredicted RBP14.09□□□□□ -0.15
SKA3-204ENST00000462482 DTNBP1Q96EV8 351 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 TMEM41AQ96HV5 264 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 GNRHR2Q96P88 292 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 FRG2BQ96QU4 278 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 TRIB1Q96RU8 372 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 TMUB1Q9BVT8 246 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 PRDM14Q9GZV8 571 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 CXXC4Q9H2H0 198 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 ELOVL6Q9H5J4 265 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 BCAP29Q9UHQ4 241 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 PSME2Q9UL46 239 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 SLC6A5Q9Y345 797 aa14.09□□□□□ -0.15
SKA3-204ENST00000462482 CD8B2A6NJW9 211 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 EEF1E1-BLOC1S5C9J1V9 151 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 GNB5O14775 395 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 EEF1E1O43324 174 aaKnown RBP14.08□□□□□ -0.16
SKA3-204ENST00000462482 KRT38O76015 456 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 SIX3O95343 332 aaPredicted RBP14.08□□□□□ -0.16
SKA3-204ENST00000462482 CLPSP04118 112 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 CPMP14384 443 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 NAGAP17050 411 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 CTSSP25774 331 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 CASP3P42574 277 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 KRTAP21-3Q3LHN1 58 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 BICRALQ6AI39 1079 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 TIGD3Q6B0B8 471 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 VASNQ6EMK4 673 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 ZDHHC24Q6UX98 284 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 SEM1Q6ZVN7 128 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 CAMKMTQ7Z624 323 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 PRR22Q8IZ63 422 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 VWA5B2Q8N398 1253 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 ZNF615Q8N8J6 731 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 PHF21BQ96EK2 531 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 CDK15Q96Q40 435 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 SH3GL2Q99962 352 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 BRINP2Q9C0B6 783 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 ZNF358Q9NW07 568 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 NMRK1Q9NWW6 199 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 PYCARDQ9ULZ3 195 aa14.08□□□□□ -0.16
SKA3-204ENST00000462482 C1orf226A1L170 272 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 ERN1O75460 977 aaKnown RBP14.07□□□□□ -0.16
SKA3-204ENST00000462482 ERAL1O75616 437 aaKnown RBP14.07□□□□□ -0.16
SKA3-204ENST00000462482 PPM1BO75688 479 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 ACTL6AO96019 429 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 CYP4B1P13584 511 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 BMP7P18075 431 aa14.07□□□□□ -0.16
SKA3-204ENST00000462482 CSNK2A2P19784 350 aaPredicted RBP14.07□□□□□ -0.16
SKA3-204ENST00000462482 KLK2P20151 261 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms