RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 THEGQ9P2T0 379 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 CLIP2Q9UDT6 1046 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 MIOXQ9UGB7 285 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 IL20RAQ9UHF4 553 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 RARRES3Q9UL19 164 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 AURKCQ9UQB9 309 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 SLC6A5Q9Y345 797 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 ZNF175Q9Y473 711 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 KIF3AQ9Y496 699 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 AUP1Q9Y679 476 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 PTPRUQ92729 1446 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 EIF4G3O43432 1585 aaKnown RBP3.15□□□□□ -1.91
CLK1-206ENST00000461326 POLA1P09884 1462 aaPredicted RBP3.15□□□□□ -1.91
CLK1-206ENST00000461326 IFT140Q96RY7 1462 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 RAD54L2Q9Y4B4 1467 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 TARBP1Q13395 1621 aaKnown RBP3.15□□□□□ -1.91
CLK1-206ENST00000461326 BIVM-ERCC5R4GMW8 1640 aa3.15□□□□□ -1.91
CLK1-206ENST00000461326 ZNF608Q9ULD9 1512 aaPredicted RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 SYNJ1O43426 1573 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 IGLV4-3A0A075B6K6 122 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 NPIPA5A0A0B4J1W7 369 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 FAM230AA0A1W2PPH8 454 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 SH3PXD2BA1X283 911 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 IGLON5A6NGN9 336 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 ARHGEF33A8MVX0 844 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 NPIPA5E9PKD4 350 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 NEDD8-MDP1E9PL57 170 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 F8WDY8 70 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 SOCS3O14543 225 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 SNAP91O60641 907 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 NOL3O60936 208 aaKnown RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 FRAT2O75474 233 aaPredicted RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 IGHG1P01857 330 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 FOSL2P15408 326 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 DPEP1P16444 411 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 CALRP27797 417 aaKnown RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 CAPGP40121 348 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 MTIF2P46199 727 aaKnown RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 VEGFCP49767 419 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 PEX3P56589 373 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 GABPB1Q06547 395 aaPredicted RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 ELAVL2Q12926 359 aaKnown RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 PDZK1IP1Q13113 114 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 BTG3Q14201 252 aaPredicted RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 KARSQ15046 597 aaKnown RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 CLPPQ16740 277 aaPredicted RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 STEAP1BQ6NZ63 245 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 DPY19L2P2Q6ZN68 376 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 PAQR9Q6ZVX9 377 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 KCNMB4Q86W47 210 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 BCORP1Q8N888 145 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 Q8NBF4 154 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 MINDY2Q8NBR6 621 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 CHDHQ8NE62 594 aaPredicted RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 OR1B1Q8NGR6 318 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 C11orf45Q8TAV5 145 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 RCHY1Q96PM5 261 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 TSPAN18Q96SJ8 248 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 CPXM1Q96SM3 734 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 SYT11Q9BT88 431 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 FICDQ9BVA6 458 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 RAB11FIP5Q9BXF6 653 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 RPAP3Q9H6T3 665 aaPredicted RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 Q9HAA7 133 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 ROPN1Q9HAT0 212 aaPredicted RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 SLC25A19Q9HC21 320 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 IL1RAPQ9NPH3 570 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 FAM212BQ9NTI7 297 aaPredicted RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 GTSE1Q9NYZ3 720 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 ANKMY1Q9P2S6 941 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 EIF3KQ9UBQ5 218 aaKnown RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.14□□□□□ -1.91
CLK1-206ENST00000461326 NIP7Q9Y221 180 aaKnown RBP eCLIP3.14□□□□□ -1.91
CLK1-206ENST00000461326 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.14□□□□□ -1.91
CLK1-206ENST00000461326 WDR97A6NE52 1622 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 KIF26BQ2KJY2 2108 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 ZMYM6O95789 1325 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 FAM205AQ6ZU69 1335 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 PBRM1Q86U86 1689 aa3.14□□□□□ -1.91
CLK1-206ENST00000461326 SOGA1O94964 1423 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 WRNQ14191 1432 aaPredicted RBP eCLIP3.13□□□□□ -1.91
CLK1-206ENST00000461326 NCAPD2Q15021 1401 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 TOP2BQ02880 1626 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 A0A0A6YYD4 124 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 TRGV8A0A0C4DH27 118 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 TRBV5-4A0A0C4DH59 114 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 E9PMD0 336 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 SGK494L7N484 410 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 LGALS8O00214 317 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 CYB561D2O14569 222 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 NDC80O14777 642 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 DUSP11O75319 330 aaKnown RBP3.13□□□□□ -1.91
CLK1-206ENST00000461326 STK17BO94768 372 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 DUS4LO95620 317 aaKnown RBP3.13□□□□□ -1.91
CLK1-206ENST00000461326 KRT6BP04259 564 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 SELEP16581 610 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 RPA1P27694 616 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 PTPN6P29350 595 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 PRDX2P32119 198 aa3.13□□□□□ -1.91
CLK1-206ENST00000461326 HSPA1LP34931 641 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms