RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 PPCDCQ96CD2 204 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 ZNF514Q96K75 400 aaPredicted RBP11.75□□□□□ -0.53
LINC00959-201ENST00000456581 TMEM246Q9BRR3 403 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 PRR14Q9BWN1 585 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 DPEP2Q9H4A9 486 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 WDR26Q9H7D7 661 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 CXorf36Q9H7Y0 433 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 ZNF282Q9UDV7 671 aaPredicted RBP11.75□□□□□ -0.53
LINC00959-201ENST00000456581 MALT1Q9UDY8 824 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 V9GYH0 126 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.74□□□□□ -0.53
LINC00959-201ENST00000456581 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.74□□□□□ -0.53
LINC00959-201ENST00000456581 A0A1W2PQ09 198 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 A0A1W2PQU0 124 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 H7BY64 318 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 RNASET2O00584 256 aaKnown RBP11.74□□□□□ -0.53
LINC00959-201ENST00000456581 PPM1DO15297 605 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 PRMT3O60678 531 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 TBX6O95947 436 aaPredicted RBP11.74□□□□□ -0.53
LINC00959-201ENST00000456581 TNNI3P19429 210 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 SOX6P35712 828 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 CRISP1P54107 249 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 CDC42P60953 191 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 ZNF763Q0D2J5 394 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 TEAD4Q15561 434 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 PRPF38BQ5VTL8 546 aaKnown RBP11.74□□□□□ -0.53
LINC00959-201ENST00000456581 FRMPD2BQ6IN97 320 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 TCEANCQ8N8B7 351 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 ZFP41Q8N8Y5 198 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 DENND6BQ8NEG7 585 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 C16orf78Q8WTQ4 265 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 PRAP1Q96NZ9 151 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 MACROD1Q9BQ69 325 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 PRO3102Q9H379 93 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 BRF2Q9HAW0 419 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 WBP11Q9Y2W2 641 aaKnown RBP11.74□□□□□ -0.53
LINC00959-201ENST00000456581 COL6A3P12111 3177 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 KRT8P05787 483 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 LIMS1P48059 325 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 CD83Q01151 205 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 INSL4Q14641 139 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 MLF2Q15773 248 aaPredicted RBP11.74□□□□□ -0.53
LINC00959-201ENST00000456581 METRNLQ641Q3 311 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 LAS2Q8IYD9 372 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 HORMAD2Q8N7B1 307 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 LINC01555Q8NAE3 123 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 FBXO15Q8NCQ5 510 aaPredicted RBP11.74□□□□□ -0.53
LINC00959-201ENST00000456581 GPR32P1Q8NGA4 272 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 OR52N2Q8NGI0 321 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 C17orf50Q8WW18 174 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 RAB7BQ96AH8 199 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 RAD51AP1Q96B01 352 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 S1PR5Q9H228 398 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 MVB12BQ9H7P6 319 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 IMP3Q9NV31 184 aaKnown RBP11.74□□□□□ -0.53
LINC00959-201ENST00000456581 CLDND1Q9NY35 253 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 TAS2R9Q9NYW1 312 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 ZNF221Q9UK13 617 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 MDC1Q14676 2089 aaKnown RBP11.74□□□□□ -0.53
LINC00959-201ENST00000456581 SCN2AQ99250 2005 aa11.74□□□□□ -0.53
LINC00959-201ENST00000456581 EFCAB10A6NFE3 127 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ZAR1LA6NP61 321 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 H0Y8X5 98 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 OR10H3O60404 316 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 MRPS14O60783 128 aaKnown RBP11.73□□□□□ -0.53
LINC00959-201ENST00000456581 KRT75O95678 551 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 EGFP01133 1207 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CD79BP40259 229 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 MAPK9P45984 424 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CLDN2P57739 230 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 PPP2CBP62714 309 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 PPP2CAP67775 309 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CSNK2BP67870 215 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 MRPS15P82914 257 aaKnown RBP11.73□□□□□ -0.53
LINC00959-201ENST00000456581 HSPB3Q12988 150 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CCDC58Q4VC31 144 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ANXA8L1Q5VT79 327 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 MLIPQ5VWP3 458 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 HIST2H2AA3Q6FI13 130 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ZNF770Q6IQ21 691 aaPredicted RBP11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TUBA3EQ6PEY2 450 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CEACAM20Q6UY09 585 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ZNF367Q7RTV3 350 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 KLHDC8AQ8IYD2 350 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ANKRD53Q8N9V6 530 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ELSPBP1Q96BH3 223 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 INSM2Q96T92 566 aaPredicted RBP11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TAPBPLQ9BX59 468 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ABCB9Q9NP78 766 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TAAR2Q9P1P5 351 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 VPS13AQ96RL7 3174 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TBC1D3DA0A087WVF3 549 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TBC1D3IA0A087WXS9 549 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TBC1D3EA0A087X179 549 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TBC1D3KA0A087X1G2 549 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 A0A1W2PRB8 838 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TBC1D3FA6NER0 549 aaPredicted RBP11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TBC1D3LB9A6J9 549 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TLR4O00206 839 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 B4GALT2O60909 372 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms