RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 CDK6Q00534 326 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 CDK5R2Q13319 367 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 MEP1AQ16819 746 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 ZIK1Q3SY52 487 aaPredicted RBP6.18□□□□□ -1.42
USP46-202ENST00000451218 CEACAM20Q6UY09 585 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 WDR88Q6ZMY6 472 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 USP53Q70EK8 1073 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 MRGPREQ86SM8 312 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 KIF18BQ86Y91 864 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 SMYD1Q8NB12 490 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 PIK3C3Q8NEB9 887 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 OR9Q2Q8NGE9 314 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 CNIH3Q8TBE1 160 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 FAM162AQ96A26 154 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 HRASLS5Q96KN8 279 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 KLHDC3Q9BQ90 382 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 BDH2Q9BUT1 245 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 RAB33BQ9H082 229 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 KLHL25Q9H0H3 589 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 OR51I1Q9H343 314 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 DUSP21Q9H596 190 aa6.18□□□□□ -1.42
USP46-202ENST00000451218 TUBA8Q9NY65 449 aaPredicted RBP6.18□□□□□ -1.42
USP46-202ENST00000451218 LOC100130705A0A1B0GUX0 176 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 LRRC72A6NJI9 287 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 CBX7O95931 251 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 FPR1P21462 350 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 IGFBP4P22692 258 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 DCKP27707 260 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 RRM2P31350 389 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 MC3RP41968 323 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 PIGFQ07326 219 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 HSPB3Q12988 150 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 IRF3Q14653 427 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 ZNF630Q2M218 657 aaPredicted RBP6.17□□□□□ -1.42
USP46-202ENST00000451218 LRRC23Q53EV4 343 aaPredicted RBP6.17□□□□□ -1.42
USP46-202ENST00000451218 OTUD3Q5T2D3 398 aaPredicted RBP6.17□□□□□ -1.42
USP46-202ENST00000451218 GCNT6Q5T4J0 391 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 MLIPQ5VWP3 458 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 TYW3Q6IPR3 259 aaKnown RBP6.17□□□□□ -1.42
USP46-202ENST00000451218 FIGLAQ6QHK4 219 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 NLGN4XQ8N0W4 816 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 TNIP2Q8NFZ5 429 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 TTLQ8NG68 377 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 LCN9Q8WX39 176 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 STARD5Q9NSY2 213 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 MAPRE3Q9UPY8 281 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 IGHV5-51A0A0C4DH38 117 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 FCMRO60667 390 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 FESP07332 822 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 C8orf89P0DMQ9 161 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 ELAVL4P26378 380 aaKnown RBP6.17□□□□□ -1.42
USP46-202ENST00000451218 CAPZBP47756 277 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 DSTNP60981 165 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 OLR1P78380 273 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 FOXD4Q12950 439 aaPredicted RBP6.17□□□□□ -1.42
USP46-202ENST00000451218 C1orf61Q13536 156 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 MAPK14Q16539 360 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 HIST2H2ACQ16777 129 aaPredicted RBP6.17□□□□□ -1.42
USP46-202ENST00000451218 TRMT12Q53H54 448 aaKnown RBP6.17□□□□□ -1.42
USP46-202ENST00000451218 HIST2H2AA3Q6FI13 130 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 TMEM107Q6UX40 140 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 ASPGQ86U10 573 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 SPARTQ8N0X7 666 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 DEFB119Q8N690 84 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 EXOSC8Q96B26 276 aaKnown RBP6.17□□□□□ -1.42
USP46-202ENST00000451218 LYRM4Q9HD34 91 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 COLEC10Q9Y6Z7 277 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 NCKAP5O14513 1909 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 KIR2DS5A0A0G2JLQ3 304 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 A0A0G2JNG1 304 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 KIR2DS3K7RE56 304 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 KDM1AO60341 852 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 SLC34A2O95436 690 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 GASTP01350 101 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 HMGN2P05204 90 aaKnown RBP6.17□□□□□ -1.42
USP46-202ENST00000451218 BCHEP06276 602 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 OR12D1P0DN82 309 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 KRT20P35900 424 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 GFERP55789 205 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 AQP6Q13520 282 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 KIR2DS5Q14953 304 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 EXOC3L2Q2M3D2 409 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 THEMIS2Q5TEJ8 643 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 SDE2Q6IQ49 451 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 ALDH16A1Q8IZ83 802 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 ARL14Q8N4G2 192 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 SLC5A8Q8N695 610 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 AVL9Q8NBF6 648 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 C11orf65Q8NCR3 313 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 DIO2Q92813 273 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 OR7D2Q96RA2 312 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 RBM4BQ9BQ04 359 aaKnown RBP6.17□□□□□ -1.42
USP46-202ENST00000451218 PRSS27Q9BQR3 290 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 RBM4Q9BWF3 364 aaKnown RBP6.17□□□□□ -1.42
USP46-202ENST00000451218 FAM192AQ9GZU8 254 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 LANCL2Q9NS86 450 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 CORO2BQ9UQ03 480 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 NCKAP1Q9Y2A7 1128 aa6.17□□□□□ -1.42
USP46-202ENST00000451218 TMA7Q9Y2S6 64 aaKnown RBP6.17□□□□□ -1.42
USP46-202ENST00000451218 A0A0J9YY10 115 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms