RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 MOAP1Q96BY2 351 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 LIN28AQ9H9Z2 209 aaKnown RBP16.42■□□□□ 0.22
SMC6-206ENST00000446852 EQTNQ9NQ60 294 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 PHF11Q9UIL8 331 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 TP53BP1Q12888 1972 aaPredicted RBP16.42■□□□□ 0.22
SMC6-206ENST00000446852 SOX1O00570 391 aaPredicted RBP16.42■□□□□ 0.22
SMC6-206ENST00000446852 ANXA8P13928 327 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 PPP2R1BP30154 601 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 BLKP51451 505 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 SIM1P81133 766 aaPredicted RBP16.42■□□□□ 0.22
SMC6-206ENST00000446852 PRR5P85299 388 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 MAD2L1BPQ15013 274 aaPredicted RBP16.42■□□□□ 0.22
SMC6-206ENST00000446852 TCTN3Q6NUS6 607 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 NUP43Q8NFH3 380 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 VANGL1Q8TAA9 524 aaPredicted RBP16.42■□□□□ 0.22
SMC6-206ENST00000446852 PHF10Q8WUB8 498 aaKnown RBP16.42■□□□□ 0.22
SMC6-206ENST00000446852 RERGQ96A58 199 aaPredicted RBP16.42■□□□□ 0.22
SMC6-206ENST00000446852 ISOC1Q96CN7 298 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 HRASLS5Q96KN8 279 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 ZNF354BQ96LW1 612 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 PSME2Q9UL46 239 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 PCDHGA6Q9Y5G7 932 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 THADAQ6YHU6 1953 aa16.42■□□□□ 0.22
SMC6-206ENST00000446852 URADA6NGE7 173 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 PTGES3LE9PB15 166 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 FAM227AF5H4B4 570 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 B3GALT2O43825 422 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 JUNBP17275 347 aaPredicted RBP16.41■□□□□ 0.22
SMC6-206ENST00000446852 ALOX12P18054 663 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 MAGEA8P43361 318 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 GSSP48637 474 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 CRISP3P54108 245 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 SMN1Q16637 294 aaKnown RBP16.41■□□□□ 0.22
SMC6-206ENST00000446852 ABHD13Q7L211 337 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 OR4N5Q8IXE1 308 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 BCL2L10Q9HD36 194 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 NAALAD2Q9Y3Q0 740 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 EML5Q05BV3 1969 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 PCDHGA12O60330 932 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 SERPINB7O75635 380 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 IL9P15248 144 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 MAN2A2P49641 1150 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 PTCRAQ6ISU1 281 aaPredicted RBP16.41■□□□□ 0.22
SMC6-206ENST00000446852 OOSP2Q86WS3 158 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 LRRC25Q8N386 305 aaPredicted RBP16.41■□□□□ 0.22
SMC6-206ENST00000446852 GIMAP5Q96F15 307 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 OR7D2Q96RA2 312 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 PSD2Q9BQI7 771 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 RHNO1Q9BSD3 238 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 RASSF1Q9NS23 344 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 POFUT2Q9Y2G5 429 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 SLC22A7Q9Y694 548 aa16.41■□□□□ 0.22
SMC6-206ENST00000446852 TRBV4-1A0A0J9YWV2 114 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 FAM170BA6NMN3 283 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 EPPINO95925 133 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 CBLP22681 906 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 MAOBP27338 520 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 XKP51811 444 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 MAZP56270 477 aaKnown RBP16.4■□□□□ 0.22
SMC6-206ENST00000446852 FAM111BQ6SJ93 734 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 ENTHD1Q8IYW4 607 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 SIMC1Q8NDZ2 872 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 OR7G2Q8NG99 324 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 OR13F1Q8NGS4 319 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 BBS10Q8TAM1 723 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 ZFAND2BQ8WV99 257 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 RASSF5Q8WWW0 418 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 HLA-CQ95604 372 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 ALPK1Q96QP1 1244 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 NMNAT1Q9HAN9 279 aaPredicted RBP16.4■□□□□ 0.22
SMC6-206ENST00000446852 C3orf14Q9HBI5 128 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 FAM60AQ9NP50 221 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 POMT2Q9UKY4 750 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 HCN4Q9Y3Q4 1203 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 A0A1W2PR77 199 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 A8MVJ9 347 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 WBP4O75554 376 aaKnown RBP16.4■□□□□ 0.22
SMC6-206ENST00000446852 CCNB2O95067 398 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 SPTBP11277 2137 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 POU2F1P14859 743 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 ST6GAL1P15907 406 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 CD27P26842 260 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 GPR107Q5VW38 600 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 ZNF770Q6IQ21 691 aaPredicted RBP16.4■□□□□ 0.22
SMC6-206ENST00000446852 DEF8Q6ZN54 512 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 WDR53Q7Z5U6 358 aaPredicted RBP16.4■□□□□ 0.22
SMC6-206ENST00000446852 KRT73Q86Y46 540 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 ALDH16A1Q8IZ83 802 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 APH1BQ8WW43 257 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 COL26A1Q96A83 441 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 TUBA1CQ9BQE3 449 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 NAA50Q9GZZ1 169 aaKnown RBP16.4■□□□□ 0.22
SMC6-206ENST00000446852 QRSL1Q9H0R6 528 aaKnown RBP16.4■□□□□ 0.22
SMC6-206ENST00000446852 STARD5Q9NSY2 213 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 SPAG17Q6Q759 2223 aa16.4■□□□□ 0.22
SMC6-206ENST00000446852 METTL12A8MUP2 240 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 M0R3H8 397 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 ZSCAN9O15535 394 aaPredicted RBP16.39■□□□□ 0.21
SMC6-206ENST00000446852 CSF2P04141 144 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms