RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 LOC105369274A0A096LPK9 316 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 LOC102723532A0A0G2JNH3 316 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 DCNP07585 359 aaKnown RBP24.19■■□□□ 1.46
CPNE1-216ENST00000437340 EPHA2P29317 976 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 ROR2Q01974 943 aaKnown RBP24.19■■□□□ 1.46
CPNE1-216ENST00000437340 COLEC12Q5KU26 742 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 DGLUCYQ7Z3D6 616 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 CLVS1Q8IUQ0 354 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-216ENST00000437340 SFTPA2Q8IWL1 248 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 SPARTQ8N0X7 666 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 OR4N4Q8N0Y3 316 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 LRRC25Q8N386 305 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-216ENST00000437340 AVL9Q8NBF6 648 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 FAM46DQ8NEK8 389 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 NUP43Q8NFH3 380 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 OR9A2Q8NGT5 310 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 CNIH3Q8TBE1 160 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 NECAB3Q96P71 396 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-216ENST00000437340 TPRKBQ9Y3C4 175 aa24.19■■□□□ 1.46
CPNE1-216ENST00000437340 A0A0G2JPF8 293 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 METTL12A8MUP2 240 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 HNRNPCL2B2RXH8 293 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 HNRNPCL3B7ZW38 293 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 CCNB2O95067 398 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 HNRNPCL4P0DMR1 293 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 ALPPL2P10696 532 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 SLC5A2P31639 672 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 ZXDAP98168 799 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 C1orf61Q13536 156 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 TUBA3CQ13748 450 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 RUNX2Q13950 521 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 MAD2L1BPQ15013 274 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-216ENST00000437340 NEDD8Q15843 81 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 BPIFB6Q8NFQ5 453 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 OR4K14Q8NGD5 310 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 RSPO3Q9BXY4 272 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-216ENST00000437340 KLHL25Q9H0H3 589 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 ZNF556Q9HAH1 456 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 SIT1Q9Y3P8 196 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 SLC22A7Q9Y694 548 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 SLCO1B1Q9Y6L6 691 aa24.18■■□□□ 1.46
CPNE1-216ENST00000437340 EML5Q05BV3 1969 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 A0A1W2PS29 197 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 PVRP15151 417 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 MC3RP41968 323 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 PROX2Q3B8N5 592 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 XAF1Q6GPH4 301 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 B3GNT8Q7Z7M8 397 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 IQCHQ86VS3 1027 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 PARP8Q8N3A8 854 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 DHRS1Q96LJ7 313 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 ALPK1Q96QP1 1244 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 SCN3BQ9NY72 215 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 LIPT1Q9Y234 373 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 SNX5Q9Y5X3 404 aa24.17■■□□□ 1.46
CPNE1-216ENST00000437340 FFAR1O14842 300 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 PCDH17O14917 1159 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 CSF2P04141 144 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 HTR1AP08908 422 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 DCKP27707 260 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 SNRPNP63162 240 aaKnown RBP24.16■■□□□ 1.46
CPNE1-216ENST00000437340 TCTN3Q6NUS6 607 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 ARMC6Q6NXE6 501 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 ERI1Q8IV48 349 aaKnown RBP24.16■■□□□ 1.46
CPNE1-216ENST00000437340 CADM4Q8NFZ8 388 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 OR13F1Q8NGS4 319 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 ISOC1Q96CN7 298 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 MPP4Q96JB8 637 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 NODALQ96S42 347 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 RLIMQ9NVW2 624 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 ACAD8Q9UKU7 415 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 POMT2Q9UKY4 750 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 SPACA6W5XKT8 324 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 MRPS14O60783 128 aaKnown RBP24.16■■□□□ 1.46
CPNE1-216ENST00000437340 PTGER1P34995 402 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 MAN2A2P49641 1150 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 XKP51811 444 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 SMIM11AP58511 58 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 CSNK2BP67870 215 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 FUT5Q11128 374 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 GANABQ14697 944 aaKnown RBP24.16■■□□□ 1.46
CPNE1-216ENST00000437340 ELOCQ15369 112 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 USP53Q70EK8 1073 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 TAGAPQ8N103 731 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 DOK1Q99704 481 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 SEMA6CQ9H3T2 930 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 FANCEQ9HB96 536 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 CALML5Q9NZT1 146 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 PCDHGB1Q9Y5G3 927 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 PCDHGA6Q9Y5G7 932 aa24.16■■□□□ 1.46
CPNE1-216ENST00000437340 A0A1W2PR77 199 aa24.15■■□□□ 1.46
CPNE1-216ENST00000437340 CASC3O15234 703 aaKnown RBP24.15■■□□□ 1.46
CPNE1-216ENST00000437340 TRMUO75648 421 aaKnown RBP24.15■■□□□ 1.46
CPNE1-216ENST00000437340 CHRM4P08173 479 aa24.15■■□□□ 1.46
CPNE1-216ENST00000437340 NME1P15531 152 aaKnown RBP24.15■■□□□ 1.46
CPNE1-216ENST00000437340 CBLP22681 906 aa24.15■■□□□ 1.46
CPNE1-216ENST00000437340 CD38P28907 300 aa24.15■■□□□ 1.46
CPNE1-216ENST00000437340 GGT2P36268 569 aa24.15■■□□□ 1.46
CPNE1-216ENST00000437340 CCDC71Q8IV32 467 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-216ENST00000437340 C16orf58Q96GQ5 468 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms