RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 FAM46AQ96IP4 442 aaKnown RBP14.7□□□□□ -0.06
PTPRF-206ENST00000429895 UBE2J1Q9Y385 318 aaPredicted RBP14.7□□□□□ -0.06
PTPRF-206ENST00000429895 B8ZZF3 427 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 SFTPDP35247 375 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 UGT2B10P36537 528 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 NTHL1P78549 312 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 ZNF33AQ06730 810 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 MFSD13AQ14CX5 517 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 AADACL4Q5VUY2 407 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 C22orf42Q6IC83 251 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 ZNF773Q6PK81 442 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 LARP4Q71RC2 724 aaKnown RBP eCLIP14.69□□□□□ -0.069e-10■□□□□ 10.6
PTPRF-206ENST00000429895 KCNIP1Q9NZI2 227 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 HSPB11Q9Y547 144 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 RP2O75695 350 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 CD70P32970 193 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 OR52E8Q6IFG1 317 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 VASH1Q7L8A9 365 aaPredicted RBP14.69□□□□□ -0.06
PTPRF-206ENST00000429895 TSPAN33Q86UF1 283 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 RHBDD1Q8TEB9 315 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 EIF5A2Q9GZV4 153 aaKnown RBP14.69□□□□□ -0.06
PTPRF-206ENST00000429895 SEC14L4Q9UDX3 406 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 IL20RAQ9UHF4 553 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 B3GALT1Q9Y5Z6 326 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 MYADML2A6NDP7 307 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 SCGB2A1O75556 95 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 NPR2P20594 1047 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 RTP2Q5QGT7 225 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 PDSS2Q86YH6 399 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 GALNT6Q8NCL4 622 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 SLC17A9Q9BYT1 436 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 CUEDC1Q9NWM3 386 aaPredicted RBP14.69□□□□□ -0.06
PTPRF-206ENST00000429895 DIRAS3O95661 229 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 SNAP29O95721 258 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 ERCC1P07992 297 aaPredicted RBP14.69□□□□□ -0.06
PTPRF-206ENST00000429895 ZNF81P51508 661 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 ARSFP54793 590 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 ZNF367Q7RTV3 350 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 PRR22Q8IZ63 422 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 OR4K13Q8NH42 304 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 LRIG1Q96JA1 1093 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 AP1S3Q96PC3 154 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 C8orf33Q9H7E9 229 aaPredicted RBP14.69□□□□□ -0.06
PTPRF-206ENST00000429895 C14orf119Q9NWQ9 140 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.69□□□□□ -0.06
PTPRF-206ENST00000429895 FGF3P11487 239 aaPredicted RBP14.69□□□□□ -0.06
PTPRF-206ENST00000429895 ZXDBP98169 803 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 SLC39A5Q6ZMH5 540 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 TRIM46Q7Z4K8 759 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 FTMTQ8N4E7 242 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 SYT4Q9H2B2 425 aa14.69□□□□□ -0.06
PTPRF-206ENST00000429895 MARCH4Q9P2E8 410 aaPredicted RBP14.69□□□□□ -0.06
PTPRF-206ENST00000429895 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.68□□□□□ -0.06
PTPRF-206ENST00000429895 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.68□□□□□ -0.06
PTPRF-206ENST00000429895 ACTL6BO94805 426 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 HOXD8P13378 290 aaPredicted RBP14.68□□□□□ -0.06
PTPRF-206ENST00000429895 CTHP32929 405 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 ATP4BP51164 291 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 DEFB133Q30KQ1 61 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 UGT3A2Q3SY77 523 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 GPR157Q5UAW9 335 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 XKR5Q6UX68 686 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 CFAP77Q6ZQR2 320 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 CNN2Q99439 309 aaKnown RBP14.68□□□□□ -0.06
PTPRF-206ENST00000429895 PAPOLGQ9BWT3 736 aaKnown RBP14.68□□□□□ -0.06
PTPRF-206ENST00000429895 ST14Q9Y5Y6 855 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 AGAP5A6NIR3 686 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 SLITRK5O94991 958 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 C5AR1P21730 350 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 CRISP1P54107 249 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 HMBOX1Q6NT76 420 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 UNQ6126/PRO20091Q6UXV3 157 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 NPRL2Q8WTW4 380 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 MAFIPQ8WZ33 124 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 SGCZQ96LD1 299 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 MUS81Q96NY9 551 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 PCYT2Q99447 389 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 CDH20Q9HBT6 801 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 STARD5Q9NSY2 213 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 TMEM184CQ9NVA4 438 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 CD79AP11912 226 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 SLC2A5P22732 501 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 MCCD1P59942 119 aaPredicted RBP14.68□□□□□ -0.06
PTPRF-206ENST00000429895 DSC1Q08554 894 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 TMEM25Q86YD3 366 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 ARHGAP12Q8IWW6 846 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 HS3ST5Q8IZT8 346 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 PELOQ9BRX2 385 aaKnown RBP14.68□□□□□ -0.06
PTPRF-206ENST00000429895 C2orf42Q9NWW7 574 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 EPOP01588 193 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 ADRB3P13945 408 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 ABHD17BQ5VST6 288 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 ATG9BQ674R7 924 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 AWAT2Q6E213 333 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 LRRN1Q6UXK5 716 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 SHISA6Q6ZSJ9 500 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 ZNF559Q9BR84 538 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 C16orf70Q9BSU1 422 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 C5AR2Q9P296 337 aa14.68□□□□□ -0.06
PTPRF-206ENST00000429895 KLHL21Q9UJP4 597 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms