RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 GNB5O14775 395 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 SUPT3HO75486 399 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 SEC31AO94979 1220 aaKnown RBP16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 LY6G6DO95868 133 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 CYP4B1P13584 511 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 CASP3P42574 277 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 NAGLUP54802 743 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 NRG3P56975 720 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 DR1Q01658 176 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 FOXF2Q12947 444 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 SETDB1Q15047 1291 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 Q5PR19 223 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 YRDCQ86U90 279 aaKnown RBP16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 CXorf67Q86X51 503 aaPredicted RBP16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 MED12LQ86YW9 2145 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 P3H2Q8IVL5 708 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 ZBED8Q8IZ13 594 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 TRIM31Q9BZY9 425 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 WDR41Q9HAD4 459 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 LYARQ9NX58 379 aaKnown RBP16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 NUDT4Q9NZJ9 180 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 EIF3LQ9Y262 564 aaKnown RBP16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 RTTNQ86VV8 2226 aa16.71■□□□□ 0.27
UPK3BP1-201ENST00000428678 A0A1W2PR48 441 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 CXorf49A8MYA2 514 aaPredicted RBP16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 K7EPI3 171 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 CASKO14936 926 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 TMPRSS11DO60235 418 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 EEDO75530 441 aaKnown RBP16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 SLC35E2BP0CK96 405 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 SLC35E2P0CK97 266 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 KRT15P19012 456 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 GALNSP34059 522 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 GCKP35557 465 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 GMPRP36959 345 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 PIK3CBP42338 1070 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 PCDH1Q08174 1060 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 TIGD3Q6B0B8 471 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 CYP20A1Q6UW02 462 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 FAM83FQ8NEG4 500 aaPredicted RBP16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 SMPDL3BQ92485 455 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 ISL2Q96A47 359 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 GPR22Q99680 433 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 SFXN3Q9BWM7 321 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 METTL7AQ9H8H3 244 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 CXorf21Q9HAI6 301 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 ASB4Q9Y574 426 aa16.7■□□□□ 0.26
UPK3BP1-201ENST00000428678 E7ESA3 106 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 UBXN8O00124 270 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 AIFM1O95831 613 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 ACTL6AO96019 429 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 FAM58BPP0C7Q3 252 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 EPB42P16452 691 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 PCSK6P29122 969 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 PTPN6P29350 595 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 SOX18P35713 384 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 SLCO1A2P46721 670 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 RPS13P62277 151 aaKnown RBP16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 MRM1Q6IN84 353 aaKnown RBP16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 ANGPTL8Q6UXH0 198 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 PRIMA1Q86XR5 153 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 GALNT12Q8IXK2 581 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 TEX9Q8N6V9 391 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 OR1J4Q8NGS1 313 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 STAG3L4Q8TBR4 150 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 ZPLD1Q8TCW7 415 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 UBTD2Q8WUN7 234 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 SLC44A1Q8WWI5 657 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 CDKL2Q92772 493 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 UCN3Q969E3 161 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 TMEM41AQ96HV5 264 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 COX4I2Q96KJ9 171 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 UBXN10Q96LJ8 280 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 RBBP8Q99708 897 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 TUBA1CQ9BQE3 449 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 ZNF717Q9BY31 904 aaPredicted RBP16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 ANGPTL3Q9Y5C1 460 aa16.69■□□□□ 0.26
UPK3BP1-201ENST00000428678 A0A0A6YYD5 115 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 A0A1W2PS29 197 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 KIAA1324LA8MWY0 1029 aaPredicted RBP16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 H0Y3Z8 333 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 H7C1Q1 480 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 SMPD2O60906 423 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 PTX3P26022 381 aaPredicted RBP16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 ABCD3P28288 659 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 RAB10P61026 200 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 PHEXP78562 749 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 SRYQ05066 204 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 ZKSCAN8Q15776 578 aaPredicted RBP16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 C6orf163Q5TEZ5 329 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 OR52E8Q6IFG1 317 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 PLXDC2Q6UX71 529 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 GCNT2Q8N0V5 402 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 ZNF592Q92610 1267 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 ADIPOR1Q96A54 375 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 INTS12Q96CB8 462 aaKnown RBP16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 ZFP3Q96NJ6 502 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 MDFIQ99750 246 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 TM9SF2Q99805 663 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 CPNE1Q99829 537 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms