RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 SAMD14Q8IZD0 417 aaPredicted RBP19.48■□□□□ 0.71
USP39-203ENST00000409470 CSNK1A1LQ8N752 337 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 OR9Q2Q8NGE9 314 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 MIPOL1Q8TD10 442 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 SPATA5L1Q9BVQ7 753 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 CXorf21Q9HAI6 301 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 FANCEQ9HB96 536 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 DOLKQ9UPQ8 538 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 CCDC159P0C7I6 412 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 FMO3P31513 532 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 SH3BGRP55822 239 aaPredicted RBP19.47■□□□□ 0.71
USP39-203ENST00000409470 MAZP56270 477 aaKnown RBP19.47■□□□□ 0.71
USP39-203ENST00000409470 VSX2P58304 361 aaPredicted RBP19.47■□□□□ 0.71
USP39-203ENST00000409470 ELOCQ15369 112 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 LEXMQ3ZCV2 418 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 DEF8Q6ZN54 512 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 OR4N5Q8IXE1 308 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 TMEFF1Q8IYR6 380 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 SHDQ96IW2 340 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 MPP4Q96JB8 637 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 ALPK1Q96QP1 1244 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 OR7D2Q96RA2 312 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 PITX2Q99697 317 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 RSPO3Q9BXY4 272 aaPredicted RBP19.47■□□□□ 0.71
USP39-203ENST00000409470 MIR1-1HGQ9H1L0 117 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 AASSQ9UDR5 926 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 HCN4Q9Y3Q4 1203 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 SNX5Q9Y5X3 404 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 SPACA6W5XKT8 324 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 CSF2P04141 144 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 CHRM4P08173 479 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 LIMS1P48059 325 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 COLEC12Q5KU26 742 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 MANEAQ5SRI9 462 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 PRSS41Q7RTY9 318 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 LMX1AQ8TE12 382 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 ZNF566Q969W8 418 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 NIPSNAP1Q9BPW8 284 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 SEMA6CQ9H3T2 930 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 LYRM4Q9HD34 91 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 BCL2L10Q9HD36 194 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 POMT2Q9UKY4 750 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 SLC22A7Q9Y694 548 aa19.47■□□□□ 0.71
USP39-203ENST00000409470 A8MVJ9 347 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 SOX1O00570 391 aaPredicted RBP19.46■□□□□ 0.71
USP39-203ENST00000409470 FFAR1O14842 300 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 XPNPEP2O43895 674 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 CPNE6O95741 557 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 FUT4P22083 530 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 CDH3P22223 829 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 STARD6P59095 220 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 PIGFQ07326 219 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 FUT5Q11128 374 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 B3GNT8Q7Z7M8 397 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 SPARTQ8N0X7 666 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 HRASLS5Q96KN8 279 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 TUBA1CQ9BQE3 449 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 RASSF1Q9NS23 344 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 TMEM74BQ9NUR3 256 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 KCND3Q9UK17 655 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 KCNE3Q9Y6H6 103 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 NINQ8N4C6 2090 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 A0A0G2JPF8 293 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 A0A1W2PR77 199 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 HNRNPCL2B2RXH8 293 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 HNRNPCL3B7ZW38 293 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 TLR4O00206 839 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 HNRNPCL4P0DMR1 293 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 NME1P15531 152 aaKnown RBP19.46■□□□□ 0.71
USP39-203ENST00000409470 ST6GAL1P15907 406 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 SLC5A2P31639 672 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 GSSP48637 474 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 NUP107P57740 925 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 RPL6Q02878 288 aaKnown RBP19.46■□□□□ 0.71
USP39-203ENST00000409470 LSAMPQ13449 338 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 MAD2L1BPQ15013 274 aaPredicted RBP19.46■□□□□ 0.71
USP39-203ENST00000409470 FGD3Q5JSP0 725 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 TCTN3Q6NUS6 607 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 HMGN2P46Q86SG4 172 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 GKN2Q86XP6 184 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 RBM45Q8IUH3 476 aaKnown RBP19.46■□□□□ 0.71
USP39-203ENST00000409470 SIX5Q8N196 739 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 ACTRT3Q9BYD9 372 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 CCDC90BQ9GZT6 254 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 SLC24A3Q9HC58 644 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 STARD5Q9NSY2 213 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 SCN3BQ9NY72 215 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 TMCC3Q9ULS5 477 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 TPRKBQ9Y3C4 175 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 NAALAD2Q9Y3Q0 740 aa19.46■□□□□ 0.71
USP39-203ENST00000409470 UBXN7O94888 489 aa19.45■□□□□ 0.7
USP39-203ENST00000409470 POU2F1P14859 743 aa19.45■□□□□ 0.7
USP39-203ENST00000409470 JUNBP17275 347 aaPredicted RBP19.45■□□□□ 0.7
USP39-203ENST00000409470 RACK1P63244 317 aaKnown RBP19.45■□□□□ 0.7
USP39-203ENST00000409470 C6orf132Q5T0Z8 1188 aa19.45■□□□□ 0.7
USP39-203ENST00000409470 ATAD3BQ5T9A4 648 aa19.45■□□□□ 0.7
USP39-203ENST00000409470 Q6ZPB1 254 aaPredicted RBP19.45■□□□□ 0.7
USP39-203ENST00000409470 AQP11Q8NBQ7 271 aa19.45■□□□□ 0.7
USP39-203ENST00000409470 CADM4Q8NFZ8 388 aa19.45■□□□□ 0.7
USP39-203ENST00000409470 OR7G2Q8NG99 324 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms