RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 A0A0G2JPF8 293 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 A0A1W2PP18 115 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 HNRNPCL3B7ZW38 293 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 NUDT21O43809 227 aaKnown RBP13.13□□□□□ -0.31
VAPA-202ENST00000400000 HNRNPCL4P0DMR1 293 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 LCN1P31025 176 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 ZNF81P51508 661 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 OR6C4Q8NGE1 309 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 ACOT12Q8WYK0 555 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 ST6GALNAC5Q9BVH7 336 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 TP63Q9H3D4 680 aaPredicted RBP13.13□□□□□ -0.31
VAPA-202ENST00000400000 FAM120CQ9NX05 1096 aaKnown RBP13.13□□□□□ -0.31
VAPA-202ENST00000400000 LCHNA4D1U4 455 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 VSTM2BA6NLU5 285 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 ARL6IP5O75915 188 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 STC2O76061 302 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 HOXB6P17509 224 aaKnown RBP13.13□□□□□ -0.31
VAPA-202ENST00000400000 DEFB103AP81534 67 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 BCL2L15Q5TBC7 163 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 ENPP6Q6UWR7 440 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 SLC16A9Q7RTY1 509 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 TRIM46Q7Z4K8 759 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 PRODH2Q9UF12 536 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 LTN1O94822 1766 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.12□□□□□ -0.31
VAPA-202ENST00000400000 TMEM265A0A087WTH1 108 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 H7C417 338 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 KNG1P01042 644 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 IFNA2P01563 188 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 TMEM225BP0DP42 221 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 CERS1P27544 350 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 HK3P52790 923 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 NKPD1Q17RQ9 610 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 PLBD1Q6P4A8 553 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 TOR1AIP2Q8NFQ8 470 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 NTPCRQ9BSD7 190 aaKnown RBP13.12□□□□□ -0.31
VAPA-202ENST00000400000 DZANK1Q9NVP4 752 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 ACTL6BO94805 426 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 LIPCP11150 499 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 PYCR1P32322 319 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 SFRP4Q6FHJ7 346 aaPredicted RBP13.12□□□□□ -0.31
VAPA-202ENST00000400000 FIGLAQ6QHK4 219 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 C6orf120Q7Z4R8 191 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 OR5AR1Q8NGP9 310 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 FRS2Q8WU20 508 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 MAFIPQ8WZ33 124 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 SLC30A2Q9BRI3 323 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 SLC29A3Q9BZD2 475 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 HCN4Q9Y3Q4 1203 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 OARD1Q9Y530 152 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 HSPB11Q9Y547 144 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 SLC22A1O15245 554 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 GABBR2O75899 941 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 SLC10A2Q12908 348 aaPredicted RBP13.12□□□□□ -0.31
VAPA-202ENST00000400000 DAZLQ92904 295 aaKnown RBP13.12□□□□□ -0.31
VAPA-202ENST00000400000 CAMK2AQ9UQM7 478 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 PTRH2Q9Y3E5 179 aaKnown RBP13.12□□□□□ -0.31
VAPA-202ENST00000400000 ZNF175Q9Y473 711 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 MYH6P13533 1939 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 FRS3O43559 492 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 HLA-DPB1P04440 258 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 PNMTP11086 282 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 NTSR1P30989 418 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.12□□□□□ -0.31
VAPA-202ENST00000400000 LRRN1Q6UXK5 716 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 TMEFF1Q8IYR6 380 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 NUDT22Q9BRQ3 303 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 NAA11Q9BSU3 229 aaPredicted RBP13.12□□□□□ -0.31
VAPA-202ENST00000400000 HERC3Q15034 1050 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 GLT8D1Q68CQ7 371 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 PIGWQ7Z7B1 504 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 OR2T33Q8NG76 320 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 HEBP1Q9NRV9 189 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 USP36Q9P275 1121 aaKnown RBP13.12□□□□□ -0.31
VAPA-202ENST00000400000 UBE2J1Q9Y385 318 aaPredicted RBP13.12□□□□□ -0.31
VAPA-202ENST00000400000 MRC1P22897 1456 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 BCL9LQ86UU0 1499 aa13.12□□□□□ -0.31
VAPA-202ENST00000400000 UBR1Q8IWV7 1749 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 MYH2Q9UKX2 1941 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 GRIA2P42262 883 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 GCGRP47871 477 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 EMX2Q04743 252 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 HNF4GQ14541 408 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 PLEKHS1Q5SXH7 462 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 LRRC18Q8N456 261 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 OR52B6Q8NGF0 335 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 THRSPQ92748 146 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 C12orf42Q96LP6 360 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 ZNF778Q96MU6 729 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 MAPKAP1Q9BPZ7 522 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 RANBP3Q9H6Z4 567 aaPredicted RBP13.11□□□□□ -0.31
VAPA-202ENST00000400000 GPR32O75388 356 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 GJB3O75712 270 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 Q6ZSR6 202 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 PCYT2Q99447 389 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 TM9SF3Q9HD45 589 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 SCP2D1Q9UJQ7 156 aa13.11□□□□□ -0.31
VAPA-202ENST00000400000 KCPQ6ZWJ8 1503 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms