RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 C18orf63Q68DL7 685 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 LAPTM4BQ86VI4 370 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 ERI1Q8IV48 349 aaKnown RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 ZNF547Q8IVP9 402 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 FAM160A2Q8N612 972 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 FCGR1BQ92637 280 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 ACTRT3Q9BYD9 372 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 SPNS1Q9H2V7 528 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 DDX28Q9NUL7 540 aaKnown RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 BTBD3Q9Y2F9 522 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 POLR1DQ9Y2S0 133 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 PCDHGB5Q9Y5G0 923 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 MAU2Q9Y6X3 613 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 CROCCQ5TZA2 2017 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 PLRG1O43660 514 aaKnown RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 TCEA1P23193 301 aaKnown RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 CSNK1EP49674 416 aaKnown RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 MAZP56270 477 aaKnown RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 PCDH1Q08174 1060 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 BNIP3Q12983 259 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 GAB1Q13480 694 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 RAB39AQ14964 217 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 LAS2Q8IYD9 372 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 GHDCQ8N2G8 530 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 KLHL6Q8WZ60 621 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 SLCO4A1Q96BD0 722 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 TMIGD2Q96BF3 282 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 UBE2ZQ9H832 354 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 TMEM165Q9HC07 324 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 TIMMDC1Q9NPL8 285 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 ACSS1Q9NUB1 689 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 ADAM29Q9UKF5 820 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 N6AMT1Q9Y5N5 214 aa13.28□□□□□ -0.28
SCAF4-202ENST00000399804 ARID1BQ8NFD5 2236 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-202ENST00000399804 PCNTO95613 3336 aa13.27□□□□□ -0.28
SCAF4-202ENST00000399804 FAAHO00519 579 aa13.27□□□□□ -0.28
SCAF4-202ENST00000399804 HMGN1P05114 100 aa13.27□□□□□ -0.28
SCAF4-202ENST00000399804 IFI30P13284 250 aa13.27□□□□□ -0.28
SCAF4-202ENST00000399804 PDZK1Q5T2W1 519 aa13.27□□□□□ -0.28
SCAF4-202ENST00000399804 MCATQ8IVS2 390 aaKnown RBP13.27□□□□□ -0.28
SCAF4-202ENST00000399804 PHOSPHO1Q8TCT1 267 aa13.27□□□□□ -0.28
SCAF4-202ENST00000399804 TP53INP1Q96A56 240 aa13.27□□□□□ -0.28
SCAF4-202ENST00000399804 TBL1XR1Q9BZK7 514 aa13.27□□□□□ -0.28
SCAF4-202ENST00000399804 KIR3DX1Q9H7L2 352 aa13.27□□□□□ -0.28
SCAF4-202ENST00000399804 NAALAD2Q9Y3Q0 740 aa13.27□□□□□ -0.28
SCAF4-202ENST00000399804 ATG4BQ9Y4P1 393 aa13.27□□□□□ -0.28
SCAF4-202ENST00000399804 PCDHGA8Q9Y5G5 932 aa13.27□□□□□ -0.28
SCAF4-202ENST00000399804 SLC1A7O00341 560 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 DUX1O43812 170 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 CRISP1P54107 249 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 DECR1Q16698 335 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 TSPYL5Q86VY4 417 aaPredicted RBP13.27□□□□□ -0.29
SCAF4-202ENST00000399804 MFSD9Q8NBP5 474 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 OR4K5Q8NGD3 323 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 MKKSQ9NPJ1 570 aaPredicted RBP13.27□□□□□ -0.29
SCAF4-202ENST00000399804 AASSQ9UDR5 926 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 MICAL3Q7RTP6 2002 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 A0A0G2JPF8 293 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 EFCAB9A8MZ26 197 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 HNRNPCL3B7ZW38 293 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 PLOD2O00469 737 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 LCMT2O60294 686 aaKnown RBP13.27□□□□□ -0.29
SCAF4-202ENST00000399804 STX11O75558 287 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 ALPLP05186 524 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 HNRNPCL4P0DMR1 293 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 ARAFP10398 606 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 GRK6P43250 576 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 MVKQ03426 396 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 ST3GAL4Q11206 333 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 ABHD17CQ6PCB6 329 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 CHERPQ8IWX8 916 aaKnown RBP13.27□□□□□ -0.29
SCAF4-202ENST00000399804 SLC6A18Q96N87 628 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 MED31Q9Y3C7 131 aa13.27□□□□□ -0.29
SCAF4-202ENST00000399804 HEMK1Q9Y5R4 338 aaPredicted RBP13.27□□□□□ -0.29
SCAF4-202ENST00000399804 ZDBF2Q9HCK1 2354 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 KLHL18O94889 574 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 MAP2K4P45985 399 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 ITGA1P56199 1179 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 GRM7Q14831 915 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 KLHL22Q53GT1 634 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 TMPRSS11AQ6ZMR5 421 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 GATSQ8NAP1 163 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 SLC37A2Q8TED4 501 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 RIT1Q92963 219 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 CD180Q99467 661 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 CRNNQ9UBG3 495 aaPredicted RBP13.26□□□□□ -0.29
SCAF4-202ENST00000399804 ASPDHA6ND91 283 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 LRIT2A6NDA9 550 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 ELOA3DA6NLF2 546 aaPredicted RBP13.26□□□□□ -0.29
SCAF4-202ENST00000399804 TNFRSF10CO14798 259 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 PCDHGA12O60330 932 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 MT-ND2P03891 347 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 POU2F2P09086 479 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 AGXTP21549 392 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 NUDT1P36639 197 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 KIAA1024LP59773 190 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 MXD1Q05195 221 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 ELOA3BQ3SY89 546 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 SLC35F1Q5T1Q4 408 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 ELOA3Q8NG57 546 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms