RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ZNF624Q9P2J8 865 aaPredicted RBP7.81□□□□□ -1.16
PTPRD-204ENST00000397606 ATXN7L1Q9ULK2 861 aaPredicted RBP7.81□□□□□ -1.16
PTPRD-204ENST00000397606 ERVK-19Q9WJR5 959 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 TRPM6Q9BX84 2022 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 A6NCN8 305 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 KPNA4O00629 521 aaPredicted RBP7.81□□□□□ -1.16
PTPRD-204ENST00000397606 SBK3P0C264 359 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 S100A5P33763 92 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 RUNDC3AQ59EK9 446 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 ABHD17BQ5VST6 288 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 BROXQ5VW32 411 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 SHISA6Q6ZSJ9 500 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 THAP5Q7Z6K1 395 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 SERPINA11Q86U17 422 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 APLFQ8IW19 511 aaPredicted RBP7.81□□□□□ -1.16
PTPRD-204ENST00000397606 SLC5A8Q8N695 610 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 GTF2H4Q92759 462 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 MS4A6EQ96DS6 147 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 SH3YL1Q96HL8 342 aaPredicted RBP7.81□□□□□ -1.16
PTPRD-204ENST00000397606 TUBB1Q9H4B7 451 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 ZBTB20Q9HC78 741 aaPredicted RBP7.81□□□□□ -1.16
PTPRD-204ENST00000397606 B4GALT7Q9UBV7 327 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 TMEM5Q9Y2B1 443 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 ASB1Q9Y576 335 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 PCDHGA7Q9Y5G6 932 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 NME4O00746 187 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 PLPP1O14494 284 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 ZNF749O43361 778 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 MFN2O95140 757 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 PGM3O95394 542 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 AHSA1O95433 338 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 FURINP09958 794 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 TSPAN19P0C672 248 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 CKMT2P17540 419 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 AHCYP23526 432 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 PEX19P40855 299 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 ST13P50502 369 aaKnown RBP7.81□□□□□ -1.16
PTPRD-204ENST00000397606 MYBPC3Q14896 1274 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 SGCBQ16585 318 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 NAGSQ8N159 534 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 OR14A16Q8NHC5 309 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 TMBIM1Q969X1 311 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 DKKL1Q9UK85 242 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 OAZ3Q9UMX2 235 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 SLC22A7Q9Y694 548 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 SOX1O00570 391 aaPredicted RBP7.81□□□□□ -1.16
PTPRD-204ENST00000397606 TRAPPC6AO75865 159 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 RCBTB2O95199 551 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 GGT1P19440 569 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 RAB15P59190 212 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 DCAF7P61962 342 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 TMEM44Q2T9K0 475 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 PIGGQ5H8A4 983 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 FAM69BQ5VUD6 431 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 BMP8AQ7Z5Y6 402 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 OR10Q1Q8NGQ4 319 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 ASB15Q8WXK1 588 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 RFKQ969G6 155 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 DACT3Q96B18 629 aaPredicted RBP7.81□□□□□ -1.16
PTPRD-204ENST00000397606 TM4SF18Q96CE8 201 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 MVB12AQ96EY5 273 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 SLC45A3Q96JT2 553 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 ALPK1Q96QP1 1244 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 IFT27Q9BW83 186 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 COQ10BQ9H8M1 238 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 PAPOLBQ9NRJ5 636 aaKnown RBP7.81□□□□□ -1.16
PTPRD-204ENST00000397606 TEX10Q9NXF1 929 aaPredicted RBP7.81□□□□□ -1.16
PTPRD-204ENST00000397606 ALKBH4Q9NXW9 302 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 PPP4R1LQ9P1A2 415 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 MKLN1Q9UL63 735 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 POFUT2Q9Y2G5 429 aa7.81□□□□□ -1.16
PTPRD-204ENST00000397606 CPSF4LA6NMK7 179 aaKnown RBP7.8□□□□□ -1.16
PTPRD-204ENST00000397606 EI24O14681 340 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 SCO2O43819 266 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 HMGN1P05114 100 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 ICAM2P13598 275 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 PRG2P13727 222 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 MAT1AQ00266 395 aaKnown RBP7.8□□□□□ -1.16
PTPRD-204ENST00000397606 SRSF5Q13243 272 aaKnown RBP7.8□□□□□ -1.16
PTPRD-204ENST00000397606 TIMM50Q3ZCQ8 353 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 PLK5Q496M5 336 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 CPZQ66K79 652 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 LAIR1Q6GTX8 287 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 PACS2Q86VP3 889 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 HORMAD2Q8N7B1 307 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 ZNF578Q96N58 590 aaPredicted RBP7.8□□□□□ -1.16
PTPRD-204ENST00000397606 ZNF570Q96NI8 536 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 NECAB3Q96P71 396 aaPredicted RBP7.8□□□□□ -1.16
PTPRD-204ENST00000397606 FCRL4Q96PJ5 515 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 NSG1A0A0A6YYJ2 146 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 CTNSO60931 367 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 IGHV4-34P06331 123 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 PGCP20142 388 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 AVPR2P30518 371 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 NR0B1P51843 470 aaKnown RBP7.8□□□□□ -1.16
PTPRD-204ENST00000397606 HSD17B7P56937 341 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 NEDD8Q15843 81 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 LCN8Q6JVE9 175 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 SLC48A1Q6P1K1 146 aa7.8□□□□□ -1.16
PTPRD-204ENST00000397606 SLC25A36Q96CQ1 311 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms