RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ALOX15P16050 662 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-203ENST00000397378 CD22P20273 847 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 GALNSP34059 522 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 GGT5P36269 586 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 CASP3P42574 277 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 TMED10P49755 219 aaKnown RBP8.55□□□□□ -1.04
NEDD9-203ENST00000397378 CASP9P55211 416 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 FBXW4P57775 412 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 HERVK_113P63132 956 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 ERVK-8P63133 956 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 DEFA6Q01524 100 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 LAPTM5Q13571 262 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 AP5B1Q2VPB7 878 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 C18orf21Q32NC0 220 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-203ENST00000397378 TMEM35AQ53FP2 167 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 PRAMEF9Q5VWM5 478 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 BICRALQ6AI39 1079 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 TIGD3Q6B0B8 471 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 IL17RELQ6ZVW7 336 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 OR4N5Q8IXE1 308 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 FAM83FQ8NEG4 500 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-203ENST00000397378 SLC44A1Q8WWI5 657 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 TANKQ92844 425 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 WNT2BQ93097 391 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 TP53INP1Q96A56 240 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 PPWD1Q96BP3 646 aaKnown RBP8.55□□□□□ -1.04
NEDD9-203ENST00000397378 INTS12Q96CB8 462 aaKnown RBP8.55□□□□□ -1.04
NEDD9-203ENST00000397378 ZMYND19Q96E35 227 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-203ENST00000397378 TMEM41AQ96HV5 264 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 VPS39Q96JC1 886 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 LCORQ96JN0 433 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-203ENST00000397378 FAM111AQ96PZ2 611 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 TUBA1CQ9BQE3 449 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 EFCAB11Q9BUY7 163 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 ERVK-6Q9BXR3 956 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 RPF2Q9H7B2 306 aaKnown RBP8.55□□□□□ -1.04
NEDD9-203ENST00000397378 SNX15Q9NRS6 342 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 DNAJC11Q9NVH1 559 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 TMEM160Q9NX00 188 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 MS4A12Q9NXJ0 267 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 PACSIN3Q9UKS6 424 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 ERVK-19Q9WJR5 959 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 WIF1Q9Y5W5 379 aa8.55□□□□□ -1.04
NEDD9-203ENST00000397378 PKD1L1Q8TDX9 2849 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 SERINC4A6NH21 518 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 RTCAO00442 366 aaKnown RBP8.54□□□□□ -1.04
NEDD9-203ENST00000397378 TNFSF13O75888 250 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 CLPSP04118 112 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 CHMP24386 653 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 PTPN6P29350 595 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 GCKP35557 465 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 CASP2P42575 452 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 RPS4XP62701 263 aaKnown RBP8.54□□□□□ -1.04
NEDD9-203ENST00000397378 RPP38P78345 283 aaKnown RBP8.54□□□□□ -1.04
NEDD9-203ENST00000397378 TNFRSF17Q02223 184 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 FAM27E3Q08E93 113 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 DOC2AQ14183 400 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 E2F2Q14209 437 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 ZNF267Q14586 743 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-203ENST00000397378 TOMM20Q15388 145 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 TGFBIQ15582 683 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 TSNQ15631 228 aaKnown RBP8.54□□□□□ -1.04
NEDD9-203ENST00000397378 TBCCQ15814 346 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 PAGE2BQ5JRK9 111 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 CDKL4Q5MAI5 379 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 RNASEH2BQ5TBB1 312 aaKnown RBP8.54□□□□□ -1.04
NEDD9-203ENST00000397378 TMEM81Q6P7N7 255 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 ENPP6Q6UWR7 440 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 FRA10AC1Q70Z53 315 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 ZNF550Q7Z398 422 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 PPIL6Q8IXY8 311 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 TCAIMQ8N3R3 496 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 ZNF473Q8WTR7 871 aaKnown RBP8.54□□□□□ -1.04
NEDD9-203ENST00000397378 UCN3Q969E3 161 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 MAGOHBQ96A72 148 aaKnown RBP8.54□□□□□ -1.04
NEDD9-203ENST00000397378 MARK4Q96L34 752 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 TMEM79Q9BSE2 394 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 PHACTR1Q9C0D0 580 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 SLCO5A1Q9H2Y9 848 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 C12orf65Q9H3J6 166 aaKnown RBP8.54□□□□□ -1.04
NEDD9-203ENST00000397378 CNOT10Q9H9A5 744 aaKnown RBP8.54□□□□□ -1.04
NEDD9-203ENST00000397378 TEX10Q9NXF1 929 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-203ENST00000397378 WWOXQ9NZC7 414 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 SLC17A6Q9P2U8 582 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 CLCF1Q9UBD9 225 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 CTNNAL1Q9UBT7 734 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 PHF11Q9UIL8 331 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 LAMP3Q9UQV4 416 aa8.54□□□□□ -1.04
NEDD9-203ENST00000397378 YLPM1P49750 1951 aaKnown RBP8.53□□□□□ -1.04
NEDD9-203ENST00000397378 PCNX3Q9H6A9 2034 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 C2orf92A0A1B0GVN3 265 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 H0Y3Z8 333 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 TAPBPO15533 448 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 SMNDC1O75940 238 aaKnown RBP eCLIP8.53□□□□□ -1.04
NEDD9-203ENST00000397378 GPR75O95800 540 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 CRHP06850 196 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 RHOXF2BP0C7M4 288 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 LOXP28300 417 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-203ENST00000397378 SERPINB1P30740 379 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 473.1 ms