RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 NTRK2Q16620 822 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 C12orf73Q69YU5 71 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 CD200R1LQ6Q8B3 271 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 PM20D2Q8IYS1 436 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 CLRN3Q8NCR9 226 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 POF1BQ8WVV4 589 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 MYO19Q96H55 970 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 CXorf58Q96LI9 332 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 RPRD1AQ96P16 312 aaPredicted RBP13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 H2AFJQ9BTM1 129 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 EBPLQ9BY08 206 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 ZCCHC4Q9H5U6 513 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 BPIFA1Q9NP55 256 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 SLC35C2Q9NQQ7 365 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 PIPSLA2A3N6 862 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 FAM227AF5H4B4 570 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 INPPL1O15357 1258 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 GPR39O43194 453 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 RAB36O95755 333 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 OSMP13725 252 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 ILKQ13418 452 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 OCLNQ16625 522 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 OR2G6Q5TZ20 316 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 RASSF6Q6ZTQ3 369 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 SLC24A5Q71RS6 500 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 FTMTQ8N4E7 242 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 TCEANCQ8N8B7 351 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 OR8J1Q8NGP2 316 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 HSD17B8Q92506 261 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 ERMAPQ96PL5 475 aaPredicted RBP13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 C12orf57Q99622 126 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 POMT2Q9UKY4 750 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 PCDHB8Q9UN66 801 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 CACNG2Q9Y698 323 aa13.91□□□□□ -0.18
VPS9D1-201ENST00000389386 FRMPD3Q5JV73 1810 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 VWA8A3KMH1 1905 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 DNASE2O00115 360 aaPredicted RBP13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 SH3BP5O60239 455 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 SLC19A2O60779 497 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 ADAM11O75078 769 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 ITPKAP23677 461 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 GABRA5P31644 462 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 WNT4P56705 351 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 OPCMLQ14982 345 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 CTXN3Q4LDR2 81 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 UNC5DQ6UXZ4 953 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 SYT12Q8IV01 421 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 NXPE3Q969Y0 559 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 RFT1Q96AA3 541 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 SCLYQ96I15 445 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 SLC38A2Q96QD8 506 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 RHCGQ9UBD6 479 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 EXTL2Q9UBQ6 330 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 TESQ9UGI8 421 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 SHISA3A0PJX4 238 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 PRRG1O14668 218 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 ABCD4O14678 606 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 PRMT3O60678 531 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 PRAMEF11O60813 436 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 RAMP2O60895 175 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 STK16O75716 305 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 SOX14O95416 240 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 ATRAIDQ6UW56 229 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 RSPO2Q6UXX9 243 aaPredicted RBP13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 MBOAT1Q6ZNC8 495 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 IGSF8Q969P0 613 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 MYEOVQ96EZ4 313 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 SFXN2Q96NB2 322 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 SECISBP2Q96T21 854 aaKnown RBP13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 SEPT5Q99719 369 aaPredicted RBP13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 NLNQ9BYT8 704 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 CORO2BQ9UQ03 480 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 NUBP2Q9Y5Y2 271 aa13.9□□□□□ -0.18
VPS9D1-201ENST00000389386 RANBP2P49792 3224 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 TRDV1A0A1B0GX56 115 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 TCRBP04435 133 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 NMBP08949 121 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 RHCEP18577 417 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 PPIBP23284 216 aaKnown RBP13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 AHCYP23526 432 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 MMP12P39900 470 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 CCL23P55773 120 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 DSC1Q08554 894 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 SCRN3Q0VDG4 424 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 GAB1Q13480 694 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 HEPACAMQ14CZ8 416 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 ST3GAL2Q16842 350 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 MS4A13Q5J8X5 152 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 CASP12Q6UXS9 341 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 C3P1Q6ZMU1 363 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 TMEM173Q86WV6 379 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 STK40Q8N2I9 435 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 OR2T35Q8NGX2 323 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 HUS1BQ8NHY5 278 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 SLC22A8Q8TCC7 542 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 CSGALNACT1Q8TDX6 532 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 GATAD2BQ8WXI9 593 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 SCRN2Q96FV2 425 aa13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 UBL7Q96S82 380 aaPredicted RBP13.89□□□□□ -0.19
VPS9D1-201ENST00000389386 CIPCQ9C0C6 399 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms