RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 WDR87Q6ZQQ6 2873 aa17.27■□□□□ 0.36
RXRB-202ENST00000374685 TRBV4-1A0A0J9YWV2 114 aa17.27■□□□□ 0.35
RXRB-202ENST00000374685 PRAMEF27A3QJZ7 478 aa17.27■□□□□ 0.35
RXRB-202ENST00000374685 TOR1BO14657 336 aa17.27■□□□□ 0.35
RXRB-202ENST00000374685 GUCY1B2O75343 617 aa17.27■□□□□ 0.35
RXRB-202ENST00000374685 PTNP21246 168 aa17.27■□□□□ 0.35
RXRB-202ENST00000374685 ATP5A1P25705 553 aaKnown RBP17.27■□□□□ 0.35
RXRB-202ENST00000374685 C21orf33P30042 268 aaPredicted RBP17.27■□□□□ 0.35
RXRB-202ENST00000374685 KEAP1Q14145 624 aa17.27■□□□□ 0.35
RXRB-202ENST00000374685 MICAQ29983 383 aa17.27■□□□□ 0.35
RXRB-202ENST00000374685 CRB2Q5IJ48 1285 aa17.27■□□□□ 0.35
RXRB-202ENST00000374685 ABHD17CQ6PCB6 329 aa17.27■□□□□ 0.35
RXRB-202ENST00000374685 Q6ZS52 159 aa17.27■□□□□ 0.35
RXRB-202ENST00000374685 WDR92Q96MX6 357 aa17.27■□□□□ 0.35
RXRB-202ENST00000374685 FAIM2Q9BWQ8 316 aa17.27■□□□□ 0.35
RXRB-202ENST00000374685 WDR12Q9GZL7 423 aaKnown RBP17.27■□□□□ 0.35
RXRB-202ENST00000374685 ROGDIQ9GZN7 287 aa17.27■□□□□ 0.35
RXRB-202ENST00000374685 TMA7Q9Y2S6 64 aaKnown RBP17.27■□□□□ 0.35
RXRB-202ENST00000374685 NDUFS2O75306 463 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 WBP4O75554 376 aaKnown RBP17.26■□□□□ 0.35
RXRB-202ENST00000374685 LCKP06239 509 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 ITGA2P17301 1181 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 BUD31P41223 144 aaPredicted RBP17.26■□□□□ 0.35
RXRB-202ENST00000374685 PPM1FP49593 454 aaPredicted RBP17.26■□□□□ 0.35
RXRB-202ENST00000374685 RNF144AP50876 292 aaPredicted RBP17.26■□□□□ 0.35
RXRB-202ENST00000374685 TOP3AQ13472 1001 aaPredicted RBP17.26■□□□□ 0.35
RXRB-202ENST00000374685 C1orf61Q13536 156 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 INAVAQ3KP66 663 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 GPAT3Q53EU6 434 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 PERM1Q5SV97 790 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 BTLAQ7Z6A9 289 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 TSPYL5Q86VY4 417 aaPredicted RBP17.26■□□□□ 0.35
RXRB-202ENST00000374685 DEFB119Q8N690 84 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 OR9A2Q8NGT5 310 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 RAB2BQ8WUD1 216 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 MAPKAP1Q9BPZ7 522 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 C6orf106Q9H6K1 298 aaPredicted RBP17.26■□□□□ 0.35
RXRB-202ENST00000374685 HMG20AQ9NP66 347 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 IMPAD1Q9NX62 359 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 PCDHGA10Q9Y5H3 936 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 ENPP4Q9Y6X5 453 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 FRS3O43559 492 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 RECKO95980 971 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 HMGN2P05204 90 aaKnown RBP17.26■□□□□ 0.35
RXRB-202ENST00000374685 CCDC159P0C7I6 412 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 JUNBP17275 347 aaPredicted RBP17.26■□□□□ 0.35
RXRB-202ENST00000374685 MASP1P48740 699 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 IL18R1Q13478 541 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 PIN1Q13526 163 aaPredicted RBP17.26■□□□□ 0.35
RXRB-202ENST00000374685 DEFB134Q4QY38 66 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 GTF2IRD2BQ6EKJ0 949 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 GTF2IRD2Q86UP8 949 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 CACTIN-AS1Q8N1I8 211 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 OR4D11Q8NGI4 311 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 FAR1Q8WVX9 515 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 RAB11FIP5Q9BXF6 653 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 C11orf16Q9NQ32 467 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 PRDM7Q9NQW5 492 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 SEMA3GQ9NS98 782 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 ENTPD4Q9Y227 616 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 KCNE3Q9Y6H6 103 aa17.26■□□□□ 0.35
RXRB-202ENST00000374685 OR6C74A6NCV1 312 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 A8MU76 341 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 ZNF99A8MXY4 864 aaPredicted RBP17.25■□□□□ 0.35
RXRB-202ENST00000374685 FFAR1O14842 300 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 DNAJB6O75190 326 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 CCNB2O95067 398 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 GASTP01350 101 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 CELA2BP08218 269 aaPredicted RBP17.25■□□□□ 0.35
RXRB-202ENST00000374685 ZNF888P0CJ79 500 aaPredicted RBP17.25■□□□□ 0.35
RXRB-202ENST00000374685 MC3RP41968 323 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 XCR1P46094 333 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 NFATC4Q14934 902 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 SYT16Q17RD7 645 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 COMTD1Q86VU5 262 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 BPHLQ86WA6 291 aaPredicted RBP17.25■□□□□ 0.35
RXRB-202ENST00000374685 CCDC103Q8IW40 242 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 APH1BQ8WW43 257 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 RLN3Q8WXF3 142 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 TBC1D20Q96BZ9 403 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 ZNF486Q96H40 463 aaPredicted RBP17.25■□□□□ 0.35
RXRB-202ENST00000374685 MAN2B1O00754 1011 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 SLC22A1O15245 554 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 RGS10O43665 173 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 OR10H3O60404 316 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 SEMA7AO75326 666 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 TGFBR1P36897 503 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 CTSKP43235 329 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 SLC35A2P78381 396 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 LSM11P83369 360 aaKnown RBP eCLIP17.25■□□□□ 0.359e-11■□□□□ 9.8
RXRB-202ENST00000374685 Q6ZSR6 202 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 OR2L5Q8NG80 312 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 NMNAT1Q9HAN9 279 aaPredicted RBP17.25■□□□□ 0.35
RXRB-202ENST00000374685 AKIP1Q9NQ31 210 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 CYP8B1Q9UNU6 501 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 C2CD4DB7Z1M9 353 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 PCMT1P22061 227 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 HNRNPA2B1P22626 353 aaKnown RBP17.25■□□□□ 0.35
RXRB-202ENST00000374685 GABARAPL2P60520 117 aa17.25■□□□□ 0.35
RXRB-202ENST00000374685 AQP6Q13520 282 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms