RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 CREB3L2Q70SY1 520 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 CMASQ8NFW8 434 aaPredicted RBP11.91□□□□□ -0.5
TPR-201ENST00000367478 CERKQ8TCT0 537 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 FBXL20Q96IG2 436 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 DLGAP4Q9Y2H0 992 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 TCRBV7S2A1N4TA0A589 114 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 AMY2AP04746 511 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 HLA-DQB2P05538 268 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 LCKP06239 509 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 RPS13P62277 151 aaKnown RBP11.91□□□□□ -0.5
TPR-201ENST00000367478 PON2Q15165 354 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 SF3B4Q15427 424 aaKnown RBP eCLIP11.91□□□□□ -0.51e-9■■■■■ 32.8
TPR-201ENST00000367478 IL17AQ16552 155 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 SGCAQ16586 387 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 LRFN4Q6PJG9 635 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 TMPRSS7Q7RTY8 843 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 SYT14Q8NB59 555 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 C11orf84Q9BUA3 381 aaPredicted RBP11.91□□□□□ -0.5
TPR-201ENST00000367478 ACOT7O00154 380 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 CD48P09326 243 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 C6P13671 934 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 AK4P27144 223 aaPredicted RBP11.91□□□□□ -0.5
TPR-201ENST00000367478 C15orf52Q6ZUT6 534 aaKnown RBP11.91□□□□□ -0.5
TPR-201ENST00000367478 SPATC1Q76KD6 591 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 OR2M4Q96R27 311 aa11.91□□□□□ -0.5
TPR-201ENST00000367478 CSKP41240 450 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 MTNR1AP48039 350 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 SHFQ7M4L6 423 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 AKT1S1Q96B36 256 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 GGT3PA6NGU5 568 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 A8MUA0 341 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 B4DGG1 531 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 GOSR2O14653 212 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 ITGB5P18084 799 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 PAPD4Q6PIY7 484 aaKnown RBP11.9□□□□□ -0.5
TPR-201ENST00000367478 AGTRAPQ6RW13 159 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 KCTD20Q7Z5Y7 419 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 ZNF100Q8IYN0 542 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 C3orf58Q8NDZ4 430 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 OR5M3Q8NGP4 307 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 SFXN5Q8TD22 340 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 CCM2LQ9NUG4 571 aaPredicted RBP11.9□□□□□ -0.5
TPR-201ENST00000367478 B3GNT2Q9NY97 397 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 SLC22A5O76082 557 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 FUT4P22083 530 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 MC2RQ01718 297 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 NPRL3Q12980 569 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 IDO2Q6ZQW0 420 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 DPY19L4Q7Z388 723 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 TICAM1Q8IUC6 712 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 VWA5B2Q8N398 1253 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 NETO2Q8NC67 525 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 FAM83FQ8NEG4 500 aaPredicted RBP11.9□□□□□ -0.5
TPR-201ENST00000367478 SHROOM3Q8TF72 1996 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 HAS2Q92819 552 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 LRCH3Q96II8 777 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 FAM83CQ9BQN1 747 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 GCM1Q9NP62 436 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 DIP2BQ9P265 1576 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 ZNF705GA8MUZ8 300 aaPredicted RBP11.9□□□□□ -0.5
TPR-201ENST00000367478 B4GALT2O60909 372 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 C8AP07357 584 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 PGCP20142 388 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 GCGRP47871 477 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 ZNF704Q6ZNC4 412 aaPredicted RBP11.9□□□□□ -0.5
TPR-201ENST00000367478 CHTF18Q8WVB6 975 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 PPP4R1LQ9P1A2 415 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 TNS2Q63HR2 1409 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 FAM221BA6H8Z2 402 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 SNCGO76070 127 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 SERPINE2P07093 398 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 RHOP08100 348 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 BDKRB1P46663 353 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 CAV2P51636 162 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 TPRG1Q6ZUI0 275 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 ZFP82Q8N141 532 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 OR6Q1Q8NGQ2 317 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 OR10T2Q8NGX3 314 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 RPL10LQ96L21 214 aaKnown RBP11.9□□□□□ -0.5
TPR-201ENST00000367478 ZNF681Q96N22 645 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 ZNF696Q9H7X3 374 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 ERVK13-1Q9NX77 482 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 CCL22O00626 93 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 UBBP0CG47 229 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 UBCP0CG48 685 aaKnown RBP11.9□□□□□ -0.5
TPR-201ENST00000367478 NANOGP8Q6NSW7 305 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 RHEBL1Q8TAI7 183 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 NANOGQ9H9S0 305 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 SAGE1Q9NXZ1 904 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 PCDHGA6Q9Y5G7 932 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 KIF1AQ12756 1690 aa11.9□□□□□ -0.5
TPR-201ENST00000367478 OR5K4A6NMS3 321 aa11.9□□□□□ -0.51
TPR-201ENST00000367478 SLAMF1Q13291 335 aa11.9□□□□□ -0.51
TPR-201ENST00000367478 HACD2Q6Y1H2 254 aa11.9□□□□□ -0.51
TPR-201ENST00000367478 ARL14EPQ8N8R7 260 aaPredicted RBP11.9□□□□□ -0.51
TPR-201ENST00000367478 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.9□□□□□ -0.514e-7■■■■□ 23.2
TPR-201ENST00000367478 ACTRT3Q9BYD9 372 aa11.9□□□□□ -0.51
TPR-201ENST00000367478 LOC730098B7Z3J9 87 aa11.9□□□□□ -0.51
TPR-201ENST00000367478 EMC8O43402 210 aa11.9□□□□□ -0.51
TPR-201ENST00000367478 RETP07949 1114 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms