RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PIWIL3Q7Z3Z3 882 aaKnown RBP11.86□□□□□ -0.51
LIMK1-201ENST00000336180 VRK2Q86Y07 508 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 ARMC8Q8IUR7 673 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 RELTQ969Z4 430 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 NEURL3Q96EH8 262 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 METTL2AQ96IZ6 378 aaKnown RBP11.86□□□□□ -0.51
LIMK1-201ENST00000336180 COG8Q96MW5 612 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 ADAP2Q9NPF8 381 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 IL20RAQ9UHF4 553 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 CLCA2Q9UQC9 943 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 TSC22D4Q9Y3Q8 395 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 DENND4AQ7Z401 1863 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 PRR19A6NJB7 356 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 SGK494L7N484 410 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 MAGEB3O15480 346 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 HPRP00739 348 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 LCKP06239 509 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 TFPTP0C1Z6 253 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 RPL3P39023 403 aaKnown RBP11.86□□□□□ -0.51
LIMK1-201ENST00000336180 MRPS21P82921 87 aaKnown RBP11.86□□□□□ -0.51
LIMK1-201ENST00000336180 SYT16Q17RD7 645 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 ZBED5Q49AG3 693 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 IKBIPQ70UQ0 350 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 ASPGQ86U10 573 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 CCDC103Q8IW40 242 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 OR52E4Q8NGH9 312 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 PMM1Q92871 262 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 ALPK1Q96QP1 1244 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 NODALQ96S42 347 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 SEMA3GQ9NS98 782 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 ACER3Q9NUN7 267 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 GIN1Q9NXP7 522 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 GPR55Q9Y2T6 319 aaPredicted RBP11.86□□□□□ -0.51
LIMK1-201ENST00000336180 PCDHGB3Q9Y5G1 929 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 CENPVL1A0A0U1RR11 272 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 OR10H3O60404 316 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 IFNW1P05000 195 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 CPN2P22792 545 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 AVPR1BP47901 424 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 MLLT10P55197 1068 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 SHC2P98077 582 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 FUT5Q11128 374 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 NNATQ16517 81 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 ZNF630Q2M218 657 aaPredicted RBP11.85□□□□□ -0.51
LIMK1-201ENST00000336180 FAM92BQ6ZTR7 304 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 ENTHD1Q8IYW4 607 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 AVL9Q8NBF6 648 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 QRFPRQ96P65 431 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 RNF6Q9Y252 685 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 SNX5Q9Y5X3 404 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 AP1M2Q9Y6Q5 423 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 H0YGG7 62 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 HYAL3O43820 417 aaPredicted RBP11.85□□□□□ -0.51
LIMK1-201ENST00000336180 SH3BGRP55822 239 aaPredicted RBP11.85□□□□□ -0.51
LIMK1-201ENST00000336180 ARF3P61204 181 aaPredicted RBP11.85□□□□□ -0.51
LIMK1-201ENST00000336180 CHRNEQ04844 493 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 FADDQ13158 208 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 EXOSC7Q15024 291 aaKnown RBP11.85□□□□□ -0.51
LIMK1-201ENST00000336180 INAQ16352 499 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 TRMT12Q53H54 448 aaKnown RBP11.85□□□□□ -0.51
LIMK1-201ENST00000336180 FAM209AQ5JX71 171 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 ZNF425Q6IV72 752 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 PAQR7Q86WK9 346 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 SLC16A11Q8NCK7 471 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 TSTD1Q8NFU3 115 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 RPL3LQ92901 407 aaKnown RBP11.85□□□□□ -0.51
LIMK1-201ENST00000336180 SPOCK3Q9BQ16 436 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 ZNF304Q9HCX3 659 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 PRDM6Q9NQX0 595 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 PCDHGA6Q9Y5G7 932 aa11.85□□□□□ -0.51
LIMK1-201ENST00000336180 MBTPS2O43462 519 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 MFN2O95140 757 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 JUNDP17535 347 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 TNNI3P19429 210 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 CRISP3P54108 245 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 PCBP3P57721 371 aaKnown RBP11.84□□□□□ -0.51
LIMK1-201ENST00000336180 MAT1AQ00266 395 aaKnown RBP11.84□□□□□ -0.51
LIMK1-201ENST00000336180 EMX1Q04741 257 aaPredicted RBP11.84□□□□□ -0.51
LIMK1-201ENST00000336180 MAP4K2Q12851 820 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 NKAIN2Q5VXU1 208 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 OR7G2Q8NG99 324 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 FAIM2Q9BWQ8 316 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 NMNAT1Q9HAN9 279 aaPredicted RBP11.84□□□□□ -0.51
LIMK1-201ENST00000336180 GPR83Q9NYM4 423 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 PTTG2Q9NZH5 202 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 GPR89AB7ZAQ6 455 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 H3BN98 237 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 WBP4O75554 376 aaKnown RBP11.84□□□□□ -0.51
LIMK1-201ENST00000336180 MTRF1O75570 445 aaKnown RBP11.84□□□□□ -0.51
LIMK1-201ENST00000336180 GPR89BP0CG08 455 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 C7P10643 843 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 IL9P15248 144 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 ST6GAL1P15907 406 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 XKP51811 444 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 TUBA4AP68366 448 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 FZD2Q14332 565 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 SNAP47Q5SQN1 464 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 USP30Q70CQ3 517 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 PARGQ86W56 976 aa11.84□□□□□ -0.51
LIMK1-201ENST00000336180 MFSD9Q8NBP5 474 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms