RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 C15orf40Q8WUR7 153 aa11.52□□□□□ -0.57
SMG6-201ENST00000263073 IMP4Q96G21 291 aaKnown RBP11.52□□□□□ -0.57
SMG6-201ENST00000263073 ZNF514Q96K75 400 aaPredicted RBP11.52□□□□□ -0.57
SMG6-201ENST00000263073 ANKRD60Q9BZ19 345 aa11.52□□□□□ -0.57
SMG6-201ENST00000263073 REV1Q9UBZ9 1251 aa11.52□□□□□ -0.57
SMG6-201ENST00000263073 USP22Q9UPT9 525 aa11.52□□□□□ -0.57
SMG6-201ENST00000263073 M0R3H8 397 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 COCHO43405 550 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 FRS3O43559 492 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 HCRTR2O43614 444 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 CNOT4O95628 575 aaKnown RBP11.51□□□□□ -0.57
SMG6-201ENST00000263073 AMY2BP19961 511 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 PRDX3P30048 256 aaKnown RBP11.51□□□□□ -0.57
SMG6-201ENST00000263073 INCA1Q0VD86 236 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 DEFB115Q30KQ5 88 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 BEX5Q5H9J7 111 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 ARHGAP40Q5TG30 622 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 LCN8Q6JVE9 175 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 CRTC1Q6UUV9 634 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 IL20RBQ6UXL0 311 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 SLC22A17Q8WUG5 538 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 SORT1Q99523 831 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 SDHAF3Q9NRP4 125 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 HPGDSO60760 199 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 TFP02787 698 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 H2BFMP0C1H6 154 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 CD34P28906 385 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 MECP2P51608 486 aaKnown RBP11.51□□□□□ -0.57
SMG6-201ENST00000263073 INHBEP58166 350 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 DNM1P34Q6PK57 102 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMG6-201ENST00000263073 TEX10Q9NXF1 929 aaPredicted RBP11.51□□□□□ -0.57
SMG6-201ENST00000263073 AK6Q9Y3D8 172 aaKnown RBP11.51□□□□□ -0.57
SMG6-201ENST00000263073 A6NL46 340 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 SCAMP2O15127 329 aaKnown RBP11.51□□□□□ -0.57
SMG6-201ENST00000263073 AMY2AP04746 511 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 GKN3PP0CG01 181 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 ZNF35P13682 527 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 PRKCAP17252 672 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 SCNN1AP37088 669 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 FADDQ13158 208 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 UBXN2BQ14CS0 331 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 LETMD1Q6P1Q0 360 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 FAM198BQ6UWH4 519 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 ZNF551Q7Z340 670 aaPredicted RBP11.51□□□□□ -0.57
SMG6-201ENST00000263073 NOXA1Q86UR1 476 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 LAS2Q8IYD9 372 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 CYB561A3Q8NBI2 242 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 SNAPC3Q92966 411 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 BORCS8Q96FH0 119 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 OR6C2Q9NZP2 312 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 INTS6Q9UL03 887 aaKnown RBP11.51□□□□□ -0.57
SMG6-201ENST00000263073 IRS2Q9Y4H2 1338 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 ARPC4-TTLL3A0A0A6YYG9 625 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 ZNF850A8MQ14 1090 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 MT-ND4P03905 459 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 S1PR1P21453 382 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 GJA5P36382 358 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 DEFB134Q4QY38 66 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 TP53I3Q53FA7 332 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 SLC22A18Q96BI1 424 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 CMKLR1Q99788 373 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 NMNAT1Q9HAN9 279 aaPredicted RBP11.51□□□□□ -0.57
SMG6-201ENST00000263073 PCDHGA6Q9Y5G7 932 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 COL1A1P02452 1464 aaPredicted RBP11.51□□□□□ -0.57
SMG6-201ENST00000263073 CCDC163A0A0D9SF12 145 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 HSD3B1P14060 373 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 SLC11A1P49279 550 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 SPATS1Q496A3 300 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 PHF19Q5T6S3 580 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 ZC3H3Q8IXZ2 948 aaKnown RBP11.51□□□□□ -0.57
SMG6-201ENST00000263073 UBQLNLQ8IYU4 475 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 C7orf61Q8IZ16 206 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 SPARTQ8N0X7 666 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 ESX1Q8N693 406 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 NPLOC4Q8TAT6 608 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 PROKR1Q8TCW9 393 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 EVA1BQ9NVM1 165 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 CAMTA1Q9Y6Y1 1673 aa11.51□□□□□ -0.57
SMG6-201ENST00000263073 A0A0U1RQK1 487 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 MTMR11A4FU01 709 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 H7C417 338 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 AOC2O75106 756 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 ASGR2P07307 311 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 RHCEP18577 417 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 RAB3BP20337 219 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 FRKP42685 505 aaPredicted RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 MTNR1AP48039 350 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 RPL19P84098 196 aaKnown RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 PRSS48Q7RTY5 328 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 GRASPQ7Z6J2 395 aaPredicted RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 ISCA2Q86U28 154 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 TSPAN33Q86UF1 283 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 SCGB1C1Q8TD33 95 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 STK35Q8TDR2 534 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 C2orf15Q8WU43 125 aaKnown RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 CCDC32Q9BV29 185 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 SORBS1Q9BX66 1292 aaKnown RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 SLC28A3Q9HAS3 691 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 ENPP5Q9UJA9 477 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms