RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 MFAP5Q13361 173 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 TRIM25Q14258 630 aaKnown RBP12.45□□□□□ -0.42
SGCA-201ENST00000262018 SF1Q15637 639 aaKnown RBP12.45□□□□□ -0.42
SGCA-201ENST00000262018 C3AR1Q16581 482 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 MAPKAPK3Q16644 382 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 RNF148Q8N7C7 305 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 OR2L3Q8NG85 312 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 DNAJB8Q8NHS0 232 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 THOC3Q96J01 351 aaKnown RBP12.45□□□□□ -0.42
SGCA-201ENST00000262018 OR52E6Q96RD3 313 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 SARGQ9BW04 601 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 MS4A8Q9BY19 250 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 ENKD1Q9H0I2 346 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 OR51B5Q9H339 312 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 SLAMF8Q9P0V8 285 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 MCM8Q9UJA3 840 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 MAP1AP78559 2803 aaPredicted RBP12.45□□□□□ -0.42
SGCA-201ENST00000262018 H0Y3Z8 333 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 SH3BGRLO75368 114 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 KLHL18O94889 574 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 ANP32DO95626 131 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 ANXA4P09525 319 aaPredicted RBP12.45□□□□□ -0.42
SGCA-201ENST00000262018 MSL3P1P0C860 447 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 GSTM2P28161 218 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 VHLP40337 213 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 IST1P53990 364 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 EEFSECP57772 596 aaKnown RBP12.45□□□□□ -0.42
SGCA-201ENST00000262018 SLC34A1Q06495 639 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 FLOT2Q14254 428 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 RCN1Q15293 331 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 DEPDC1Q5TB30 811 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 ZNF425Q6IV72 752 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 NANOGP8Q6NSW7 305 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 ZFP1Q6P2D0 407 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 COMMD6Q7Z4G1 85 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 CAMKMTQ7Z624 323 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 TTLQ8NG68 377 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.45□□□□□ -0.42
SGCA-201ENST00000262018 N4BP2L2Q92802 583 aaPredicted RBP12.45□□□□□ -0.42
SGCA-201ENST00000262018 LMF1Q96S06 567 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 CGREF1Q99674 301 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 MDFIQ99750 246 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 RMND5AQ9H871 391 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 NANOGQ9H9S0 305 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 S100A14Q9HCY8 104 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 PRM3Q9NNZ6 103 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 BATF3Q9NR55 127 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 AHSPQ9NZD4 102 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 TINAGQ9UJW2 476 aa12.45□□□□□ -0.42
SGCA-201ENST00000262018 NCOA6Q14686 2063 aaPredicted RBP12.44□□□□□ -0.42
SGCA-201ENST00000262018 ABCA4P78363 2273 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 A0A096LPI6 279 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 TRBV5-3A0A0A0MS03 114 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 FEZF1A0PJY2 475 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 SCAMP2O15127 329 aaKnown RBP12.44□□□□□ -0.42
SGCA-201ENST00000262018 OR1F1O43749 312 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 LCMT2O60294 686 aaKnown RBP12.44□□□□□ -0.42
SGCA-201ENST00000262018 SLC19A2O60779 497 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 ERN1O75460 977 aaKnown RBP12.44□□□□□ -0.42
SGCA-201ENST00000262018 CLEC3AO75596 197 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 LRATO95237 230 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 PVRP15151 417 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 MMP11P24347 488 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 DNAJA1P31689 397 aaKnown RBP12.44□□□□□ -0.42
SGCA-201ENST00000262018 GRK3P35626 688 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 LTBQ06643 244 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 ZNF763Q0D2J5 394 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 INAQ16352 499 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 NKAIN1Q4KMZ8 207 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 LRIF1Q5T3J3 769 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 KHDRBS2Q5VWX1 349 aaKnown RBP12.44□□□□□ -0.42
SGCA-201ENST00000262018 RHBDD2Q6NTF9 364 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 MRPL14Q6P1L8 145 aaKnown RBP12.44□□□□□ -0.42
SGCA-201ENST00000262018 TRIM73Q86UV7 250 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 C19orf47Q8N9M1 422 aaKnown RBP12.44□□□□□ -0.42
SGCA-201ENST00000262018 FAM156AQ8NDB6 213 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 OR8J3Q8NGG0 315 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 OR8J2Q8NGG1 315 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 ADAMTS18Q8TE60 1221 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 CREB3L4Q8TEY5 395 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 ITCHQ96J02 903 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 DPH7Q9BTV6 452 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 CHRNA10Q9GZZ6 450 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 MYNNQ9NPC7 610 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 SERHLQ9NQF3 203 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 PLA2G3Q9NZ20 509 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 ABI3Q9P2A4 366 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 DHCR7Q9UBM7 475 aaKnown RBP12.44□□□□□ -0.42
SGCA-201ENST00000262018 L3MBTL1Q9Y468 752 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 LRRC42Q9Y546 428 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 KLK4Q9Y5K2 254 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 AP1M2Q9Y6Q5 423 aa12.44□□□□□ -0.42
SGCA-201ENST00000262018 SNRNP200O75643 2136 aaKnown RBP12.43□□□□□ -0.42
SGCA-201ENST00000262018 TRAV17A0A0B4J275 112 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 GNG14A0A1W2PPG7 69 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 SOCS6O14544 535 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 AKAP10O43572 662 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 SCN2BO60939 215 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 OR2B3O76000 313 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 CRYABP02511 175 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms