RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 TEX10Q9NXF1 929 aaPredicted RBP19.34■□□□□ 0.69
NEDD8-201ENST00000250495 PCTPQ9UKL6 214 aa19.34■□□□□ 0.69
NEDD8-201ENST00000250495 NCKAP5O14513 1909 aa19.33■□□□□ 0.69
NEDD8-201ENST00000250495 TRIM3O75382 744 aaPredicted RBP19.33■□□□□ 0.68
NEDD8-201ENST00000250495 KRT38O76015 456 aa19.33■□□□□ 0.68
NEDD8-201ENST00000250495 GDF1P27539 372 aa19.33■□□□□ 0.68
NEDD8-201ENST00000250495 SPNS3Q6ZMD2 512 aa19.33■□□□□ 0.68
NEDD8-201ENST00000250495 LIX1LQ8IVB5 337 aa19.33■□□□□ 0.68
NEDD8-201ENST00000250495 OR7G1Q8NGA0 311 aa19.33■□□□□ 0.68
NEDD8-201ENST00000250495 SLC6A15Q9H2J7 730 aa19.33■□□□□ 0.68
NEDD8-201ENST00000250495 CDC42EP4Q9H3Q1 356 aaKnown RBP19.33■□□□□ 0.68
NEDD8-201ENST00000250495 ELOVL6Q9H5J4 265 aa19.33■□□□□ 0.68
NEDD8-201ENST00000250495 ZBTB26Q9HCK0 441 aa19.33■□□□□ 0.68
NEDD8-201ENST00000250495 XPR1Q9UBH6 696 aa19.33■□□□□ 0.68
NEDD8-201ENST00000250495 ARHGAP21Q5T5U3 1957 aa19.33■□□□□ 0.68
NEDD8-201ENST00000250495 SPG11Q96JI7 2443 aa19.33■□□□□ 0.68
NEDD8-201ENST00000250495 HSPB2A8KAH6 182 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 AHRRA9YTQ3 701 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 ZWINTO95229 277 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 LRATO95237 230 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 ACSL3O95573 720 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 CT62P0C5K7 136 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 CPMP14384 443 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 PORP16435 677 aaPredicted RBP19.32■□□□□ 0.68
NEDD8-201ENST00000250495 NT5EP21589 574 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 CNTFP26441 200 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 TRPC1P48995 793 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 FBXW4P57775 412 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 TRAF3Q13114 568 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 HSPB2Q16082 182 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 GGTA1PQ4G0N0 100 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 TMEM64Q6YI46 380 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 PACS2Q86VP3 889 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 TMEM200AQ86VY9 491 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 ULK2Q8IYT8 1036 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 METTL4Q8N3J2 472 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 ZNF615Q8N8J6 731 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 C17orf47Q8NEP4 570 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 SPPL2AQ8TCT8 520 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 ADIPOR1Q96A54 375 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 MRPL57Q9BQC6 102 aaKnown RBP19.32■□□□□ 0.68
NEDD8-201ENST00000250495 ANGPTL4Q9BY76 406 aa19.32■□□□□ 0.68
NEDD8-201ENST00000250495 MRPL1Q9BYD6 325 aaKnown RBP19.32■□□□□ 0.68
NEDD8-201ENST00000250495 AKAP9Q99996 3911 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 MED13LQ71F56 2210 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 C15orf38-AP3S2A0A0A6YYH1 394 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 A0A1W2PS29 197 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 C1orf226A1L170 272 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 TRAPPC6AO75865 159 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 URI1O94763 535 aaPredicted RBP19.31■□□□□ 0.68
NEDD8-201ENST00000250495 KRT15P19012 456 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 MASP1P48740 699 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 MAPK12P53778 367 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 RIPPLY3P57055 190 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 DUSP8Q13202 625 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 SF3B4Q15427 424 aaKnown RBP eCLIP19.31■□□□□ 0.683e-15■■■■□ 24.1
NEDD8-201ENST00000250495 SGO1Q5FBB7 561 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 UBAP2Q5T6F2 1119 aaKnown RBP19.31■□□□□ 0.68
NEDD8-201ENST00000250495 WDR53Q7Z5U6 358 aaPredicted RBP19.31■□□□□ 0.68
NEDD8-201ENST00000250495 OR4F6Q8NGB9 312 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 RILPQ96NA2 401 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 NSUN5Q96P11 429 aaKnown RBP19.31■□□□□ 0.68
NEDD8-201ENST00000250495 PAFAH2Q99487 392 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 NMRK1Q9NWW6 199 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 PSME2Q9UL46 239 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 CFL2Q9Y281 166 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 PCDHA9Q9Y5H5 950 aa19.31■□□□□ 0.68
NEDD8-201ENST00000250495 GOLGA6L10A6NI86 522 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 CDH16O75309 829 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 EPPINO95925 133 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 OTCP00480 354 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 NAGAP17050 411 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 PEX19P40855 299 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 DLX5P56178 289 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 WHAMMP3Q1A5X7 153 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 ARSKQ6UWY0 536 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 SELENOMQ8WWX9 145 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 IFT81Q8WYA0 676 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 LRRC46Q96FV0 321 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 MRPL46Q9H2W6 279 aaKnown RBP19.3■□□□□ 0.68
NEDD8-201ENST00000250495 CES1P1Q9UKY3 287 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 SNX6Q9UNH7 406 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 SLC12A4Q9UP95 1085 aa19.3■□□□□ 0.68
NEDD8-201ENST00000250495 POC1B-GALNT4F8VUJ3 575 aa19.29■□□□□ 0.68
NEDD8-201ENST00000250495 SLU7O95391 586 aaKnown RBP19.29■□□□□ 0.68
NEDD8-201ENST00000250495 HPNP05981 417 aa19.29■□□□□ 0.68
NEDD8-201ENST00000250495 RPS17P08708 135 aaKnown RBP19.29■□□□□ 0.68
NEDD8-201ENST00000250495 CASP3P42574 277 aa19.29■□□□□ 0.68
NEDD8-201ENST00000250495 CDK9P50750 372 aaKnown RBP19.29■□□□□ 0.68
NEDD8-201ENST00000250495 MAP4K2Q12851 820 aa19.29■□□□□ 0.68
NEDD8-201ENST00000250495 SLC48A1Q6P1K1 146 aa19.29■□□□□ 0.68
NEDD8-201ENST00000250495 COMMD6Q7Z4G1 85 aa19.29■□□□□ 0.68
NEDD8-201ENST00000250495 PM20D2Q8IYS1 436 aa19.29■□□□□ 0.68
NEDD8-201ENST00000250495 MMGT1Q8N4V1 131 aa19.29■□□□□ 0.68
NEDD8-201ENST00000250495 FMO2Q99518 471 aa19.29■□□□□ 0.68
NEDD8-201ENST00000250495 TIMP4Q99727 224 aa19.29■□□□□ 0.68
NEDD8-201ENST00000250495 BRINP2Q9C0B6 783 aa19.29■□□□□ 0.68
NEDD8-201ENST00000250495 BRF2Q9HAW0 419 aa19.29■□□□□ 0.68
NEDD8-201ENST00000250495 DMGDHQ9UI17 866 aaKnown RBP19.29■□□□□ 0.68
NEDD8-201ENST00000250495 ZNF180Q9UJW8 692 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms