RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Lzts1P60853 599 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gbp10Q000W5 611 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Lpcat1Q3TFD2 534 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr1307Q7TQX1 312 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Samd4bQ80XS6 687 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 TufmQ8BFR5 452 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Atg4dQ8BGV9 474 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ifnl3Q8CGK6 193 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Lrrc61Q8R2R5 259 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Irak4Q8R4K2 459 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Rnf130Q8VEM1 419 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Lypd3Q91YK8 363 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Vkorc1Q9CRC0 161 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 CenpnQ9CZW2 337 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gpr88Q9EPB7 384 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Znf207Q9JMD0 495 aaKnown RBP9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Fbxw5Q9QXW2 573 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 CenpeQ6RT24 2474 aaKnown RBP9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Zfp993A2A8V4 313 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Zfp992B1ASD8 573 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tas2r122D3YU55 309 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 9630041A04RikD3Z3U4 205 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm8897L7N294 181 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm6502L7N456 481 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gp5O08742 567 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Slc6a6O35316 621 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ctla4P09793 223 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 PpiaP17742 164 aaKnown RBP9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 CtgfP29268 348 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Slc6a12P31651 614 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Kcnab3P97382 249 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Bop1P97452 732 aaKnown RBP9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Defb41Q30KP6 65 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Lasp1Q61792 263 aaKnown RBP9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Mapre3Q6PER3 281 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tas2r40Q7TQB8 319 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr774Q7TRI5 312 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ablim2Q8BL65 612 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Zfp446Q8C9M8 523 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Erich5Q8K0S2 362 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 CipcQ8R0W1 432 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Zfp991Q8R1N3 573 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Dtx2Q8R3P2 619 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Abhd4Q8VD66 342 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr677Q8VF06 312 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pdk3Q922H2 415 aaKnown RBP9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cby3Q9CVN6 235 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Prl8a8Q9DAS4 241 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Yae1d1Q9DAY6 216 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ern1Q9EQY0 977 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tcrg-V7A0A0A6YYE8 116 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Igkv4-86A0A0G2JGE7 114 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 1700028J19RikA0A0U1RP08 172 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Slc9a6A1L3P4 702 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm14147A2AQX6 640 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 5830473C10RikF8VQ07 620 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 CtsaP16675 474 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 IapP24822 559 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cct3P80318 545 aaKnown RBP9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Col9a1Q05722 921 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Lemd1Q14C37 129 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tex52Q3TTI8 308 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm10644Q3TZG3 87 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ulk3Q3U3Q1 472 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Brf2Q3UAW9 420 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Xlr3cQ61806 226 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 NnatQ61979 81 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Mrps7Q80X85 242 aaKnown RBP9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 C2cd4bQ80XU5 340 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ppp1r1cQ8BKK4 108 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Atp6v1hQ8BVE3 483 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 PpcdcQ8BZB2 204 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ston1Q8CDJ8 730 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Lipt1Q8VCM4 373 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ptov1Q91VU8 416 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Zfp810Q99K45 461 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 PyurfQ9D1C3 112 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Nova1Q9JKN6 507 aaKnown RBP9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Plek2Q9WV52 353 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gsk3bQ9WV60 420 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 FhitO89106 150 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Kcnj5P48545 419 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Atxn1P54254 791 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Col28a1Q2UY11 1141 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pitpnm3Q3UHE1 974 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ddx5Q61656 614 aaKnown RBP9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pex11gQ6P6M5 241 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Kcmf1Q80UY2 381 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ntf4Q80VU4 209 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tmem121Q80XA0 318 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pcdh20Q8BIZ0 952 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Fem1abQ8C0T1 654 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 TbcelQ8C5W3 424 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Bhlhe22Q8C6A8 355 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pgm2l1Q8CAA7 621 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Irak2Q8CFA1 622 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr599Q8VG01 315 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr584Q8VGW0 319 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 4933421I07RikQ9D420 214 aa9.34□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 TescQ9JKL5 214 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms