RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ugt2a2Q6PDD0 528 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Ppp2r2bQ6ZWR4 443 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Tm7sf2Q71KT5 418 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Olfr1231Q7TQZ8 313 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Mgat4bQ812F8 548 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 4933430I17RikQ8BHW4 495 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Kyat1Q8BTY1 424 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Bend5Q8C6D4 421 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 CcsapQ8QZT2 252 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Sirt3Q8R104 334 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Vmn1r6Q8R2D4 303 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 As3mtQ91WU5 376 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 AmnQ99JB7 458 aaKnown RBP10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Sp2Q9D2H6 612 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Q9DAR0 182 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Ap3m1Q9JKC8 418 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Zbp1Q9QY24 411 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Bmp10Q9R229 421 aa10.39□□□□□ -0.75
Msh3-201ENSMUST00000022220 Alms1Q8K4E0 3251 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Chd3B1AR17 2055 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Arhgap40E9Q6X9 672 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Pias3O54714 628 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 H2-EaP01904 255 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 P04224 255 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Mup3P04939 184 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Hnrnpa1P49312 320 aaKnown RBP10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 BckdhaP50136 442 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Cav3P51637 151 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Ankub1Q3UUE9 192 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Tssk1bQ61241 365 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Olfr594Q7TRR4 311 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Q810M1 233 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 NrmQ8VC65 262 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Olfr450Q8VF81 310 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Lims2Q91XD2 341 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Mat2bQ99LB6 334 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Bud23Q9CY21 281 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Eral1Q9CZU4 437 aaKnown RBP10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Hm13Q9D8V0 378 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Yae1d1Q9DAY6 216 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Cmpk1Q9DBP5 196 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Herpud2Q9JJC9 404 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Slc7a9Q9QXA6 487 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Gm37596A0A0A6YXL2 336 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Btnl6A2CG22 539 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Aldh3b3J3QMK6 479 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 C1dO35473 141 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Tulp3O88413 460 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 AldocP05063 363 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Aldh16a1Q571I9 802 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Fam189bQ5HZJ5 669 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Ttc29Q80VM3 471 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Ccdc126Q8BIS8 140 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 IlvblQ8BU33 632 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Cts3Q91ZD5 332 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Adgrl4Q923X1 739 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Pop5Q9DB28 169 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 ClpxQ9JHS4 634 aaKnown RBP10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Hapln1Q9QUP5 356 aaKnown RBP10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 CN725425A0A087WRU1 652 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Actl10A2AKE7 346 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 AU018091E9PWS4 684 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Gm8180E9PXN0 145 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Rgs5O08850 181 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Rph3aP47708 681 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Il11ra2P70225 432 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Mup20Q5FW60 181 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Map4k2Q61161 821 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 DbhQ64237 622 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Tas2r13Q7M720 305 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Mblac2Q8BL86 279 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Spef1Q99JL1 234 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Ncbp2Q9CQ49 156 aaKnown RBP10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Ssr3Q9DCF9 185 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Zgrf1Q0VGT4 1863 aa10.38□□□□□ -0.75
Msh3-201ENSMUST00000022220 Gm13283A0A087WPG5 182 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Tcte1A6H639 498 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Tas2r122D3YU55 309 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Nthl1O35980 300 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Rpl3P27659 403 aaKnown RBP10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Gja4P28235 333 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Slc19a1P41438 512 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Stox2Q499E5 926 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Lasp1Q61792 263 aaKnown RBP10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Prokr2Q8K458 381 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Tsen15Q8R3W5 168 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Zfyve21Q8VCM3 234 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Olfr48Q8VGN4 301 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Rpl34Q9D1R9 117 aaKnown RBP10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Fam13cQ9DBR2 601 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Ubqln2Q9QZM0 638 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Rgs6Q9Z2H2 472 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Pcm1Q9R0L6 2025 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Kmt2eQ3UG20 1868 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Gm10800D3Z496 220 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Srp54bE9PXC0 504 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Gm7945F6QI24 236 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Prdx1P35700 199 aaKnown RBP10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 S100a1P56565 94 aa10.37□□□□□ -0.75
Msh3-201ENSMUST00000022220 Rps17P63276 135 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms