RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 UTS2RQ9UKP6 389 aa13.76□□□□□ -0.21
HSPG2-214ENST00000635682 ERVK-11Q9UQG0 969 aa13.76□□□□□ -0.21
HSPG2-214ENST00000635682 POLR3HQ9Y535 204 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-214ENST00000635682 PCNX1Q96RV3 2341 aa13.76□□□□□ -0.21
HSPG2-214ENST00000635682 TGFBR3LH3BV60 316 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 PGRMC2O15173 223 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 FGF4P08620 206 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 IL3P08700 152 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 CPMP14384 443 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 GALNSP34059 522 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 ETV4P43268 484 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 TNFSF10P50591 281 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 SSR4P51571 173 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 PER3P56645 1201 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 ABCE1P61221 599 aaKnown RBP13.75□□□□□ -0.21
HSPG2-214ENST00000635682 IGLV3-21P80748 117 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-214ENST00000635682 STX3Q13277 289 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 GALNTL6Q49A17 601 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 ATP6AP1LQ52LC2 224 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 AGBL2Q5U5Z8 902 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 ATG16L1Q676U5 607 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 RPUSD3Q6P087 351 aaKnown RBP13.75□□□□□ -0.21
HSPG2-214ENST00000635682 LRRC25Q8N386 305 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-214ENST00000635682 TMEM178AQ8NBL3 297 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 NFAM1Q8NET5 270 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-214ENST00000635682 C16orf78Q8WTQ4 265 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 PTPMT1Q8WUK0 201 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-214ENST00000635682 ASB15Q8WXK1 588 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 TM4SF18Q96CE8 201 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 SENP5Q96HI0 755 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-214ENST00000635682 PPP3R2Q96LZ3 170 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 BRINP2Q9C0B6 783 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 LRFN1Q9P244 771 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 WBP11Q9Y2W2 641 aaKnown RBP13.75□□□□□ -0.21
HSPG2-214ENST00000635682 YARS2Q9Y2Z4 477 aaKnown RBP13.75□□□□□ -0.21
HSPG2-214ENST00000635682 TMED5Q9Y3A6 229 aa13.75□□□□□ -0.21
HSPG2-214ENST00000635682 ABCA12Q86UK0 2595 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 A8MVJ9 347 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 PRAMEF2O60811 474 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 SKAP2O75563 359 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-214ENST00000635682 ITGA10O75578 1167 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 NTSP30990 170 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 SLC1A6P48664 564 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 MLF1P58340 268 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 ERVK-8P63133 956 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 RPL38P63173 70 aaKnown RBP13.74□□□□□ -0.21
HSPG2-214ENST00000635682 C2orf80Q0P641 193 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 OR1C1Q15619 314 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 INAQ16352 499 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 TNFAIP8L3Q5GJ75 292 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 ZNF766Q5HY98 468 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 ZNF324BQ6AW86 544 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-214ENST00000635682 GALNT18Q6P9A2 607 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 APCDD1LQ8NCL9 501 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 OR8K3Q8NH51 312 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 SLC22A8Q8TCC7 542 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 EXOSC8Q96B26 276 aaKnown RBP13.74□□□□□ -0.21
HSPG2-214ENST00000635682 FBXL20Q96IG2 436 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 BBS4Q96RK4 519 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 GAL3ST4Q96RP7 486 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 HPF1Q9NWY4 346 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 ANKRD10Q9NXR5 420 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 PPIEQ9UNP9 301 aaKnown RBP13.74□□□□□ -0.21
HSPG2-214ENST00000635682 ERVK-19Q9WJR5 959 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 CFL2Q9Y281 166 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 DNAJC15Q9Y5T4 150 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 CPAMD8Q8IZJ3 1885 aa13.74□□□□□ -0.21
HSPG2-214ENST00000635682 OR6C76A6NM76 312 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 PIP5K1BO14986 540 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 RASAL1O95294 804 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 CRYABP02511 175 aaKnown RBP13.73□□□□□ -0.21
HSPG2-214ENST00000635682 STSP08842 583 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 BGNP21810 368 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 MPIP34949 423 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 FEN1P39748 380 aaKnown RBP13.73□□□□□ -0.21
HSPG2-214ENST00000635682 TDGF1P3P51864 188 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 MAD2L1Q13257 205 aaPredicted RBP13.73□□□□□ -0.21
HSPG2-214ENST00000635682 TUBA3CQ13748 450 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 SPRED3Q2MJR0 410 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 SP5Q6BEB4 398 aaPredicted RBP13.73□□□□□ -0.21
HSPG2-214ENST00000635682 NOXRED1Q6NXP6 359 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 TUBA3EQ6PEY2 450 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 RNF165Q6ZSG1 346 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 IKBIPQ70UQ0 350 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 GPALPP1Q8IXQ4 340 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 DYDC1Q8WWB3 177 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 NR4A3Q92570 626 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 TUBGCP3Q96CW5 907 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 VIPAS39Q9H9C1 493 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 SIRT5Q9NXA8 310 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 EHD3Q9NZN3 535 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.73□□□□□ -0.21
HSPG2-214ENST00000635682 RAP2CQ9Y3L5 183 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 CLDN16Q9Y5I7 305 aa13.73□□□□□ -0.21
HSPG2-214ENST00000635682 A0A1B0GUH1 482 aa13.72□□□□□ -0.21
HSPG2-214ENST00000635682 ENO4A6NNW6 628 aa13.72□□□□□ -0.21
HSPG2-214ENST00000635682 TMEM233B4DJY2 109 aa13.72□□□□□ -0.21
HSPG2-214ENST00000635682 WWP2O00308 870 aa13.72□□□□□ -0.21
HSPG2-214ENST00000635682 PRF1P14222 555 aa13.72□□□□□ -0.21
HSPG2-214ENST00000635682 DDCP20711 480 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms