RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 ZCCHC7Q8N3Z6 543 aaKnown RBP14.85□□□□□ -0.03
CPSF1-213ENST00000620219 SERINC2Q96SA4 455 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 APOL4Q9BPW4 351 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 DOHHQ9BU89 302 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 GAREM1Q9H706 876 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 EMC8O43402 210 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 H6PDO95479 791 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 ALOX5P09917 674 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 RNH1P13489 461 aaKnown RBP14.85□□□□□ -0.03
CPSF1-213ENST00000620219 FAM111BQ6SJ93 734 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 SERPINA11Q86U17 422 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 OR2A14Q96R47 310 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 PITHD1Q9GZP4 211 aaPredicted RBP14.85□□□□□ -0.03
CPSF1-213ENST00000620219 CCDC88CQ9P219 2028 aa14.85□□□□□ -0.03
CPSF1-213ENST00000620219 KPNA4O00629 521 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-213ENST00000620219 BCKDKO14874 412 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 GABRA3P34903 492 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 RXRGP48443 463 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 KCNAB2Q13303 367 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 LARS2Q15031 903 aaKnown RBP14.84□□□□□ -0.03
CPSF1-213ENST00000620219 FAM214AQ32MH5 1076 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 DCST1Q5T197 706 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 CCNJQ5T5M9 372 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 GALNT18Q6P9A2 607 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 PRSS41Q7RTY9 318 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 VN1R5Q7Z5H4 357 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 MARVELD2Q8N4S9 558 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 HEATR5BQ9P2D3 2071 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 CHST10O43529 356 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 AGERQ15109 404 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 SYT16Q17RD7 645 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 TRIM61Q5EBN2 209 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 CPZQ66K79 652 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 RASGRP3Q8IV61 690 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 PEX5LQ8IYB4 626 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 RCBTB1Q8NDN9 531 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 PIK3C3Q8NEB9 887 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 OR10G2Q8NGC3 310 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 FAM81AQ8TBF8 368 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 GEMIN6Q8WXD5 167 aaKnown RBP14.84□□□□□ -0.03
CPSF1-213ENST00000620219 IFT80Q9P2H3 777 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-213ENST00000620219 FTSJ1Q9UET6 329 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 PCDHGB3Q9Y5G1 929 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 RASAL1O95294 804 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 HSMCR30P0CW71 290 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 FBXO42Q6P3S6 717 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 TMEM126BQ8IUX1 230 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 GPBAR1Q8TDU6 330 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 ZNF597Q96LX8 424 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 TEX12Q9BXU0 123 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 CHRDQ9H2X0 955 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 ARMC7Q9H6L4 198 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 NPIPA5A0A0B4J1W7 369 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 TCRBV5S2A0A599 114 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 DUXAA6NLW8 204 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 NPIPA7E9PJI5 369 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 NPIPA8P0DM63 369 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 TCEA1P23193 301 aaKnown RBP14.84□□□□□ -0.03
CPSF1-213ENST00000620219 GSTT1P30711 240 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 VLDLRP98155 873 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 GPR141Q7Z602 305 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 RIMKLAQ8IXN7 391 aa14.84□□□□□ -0.03
CPSF1-213ENST00000620219 THAP3Q8WTV1 239 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-213ENST00000620219 CCNA2P20248 432 aa14.83□□□□□ -0.03
CPSF1-213ENST00000620219 CD247P20963 164 aa14.83□□□□□ -0.03
CPSF1-213ENST00000620219 DNAJA1P31689 397 aaKnown RBP14.83□□□□□ -0.03
CPSF1-213ENST00000620219 XCR1P46094 333 aa14.83□□□□□ -0.03
CPSF1-213ENST00000620219 HOXC5Q00444 222 aa14.83□□□□□ -0.03
CPSF1-213ENST00000620219 DMWDQ09019 674 aa14.83□□□□□ -0.03
CPSF1-213ENST00000620219 MEP1AQ16819 746 aa14.83□□□□□ -0.03
CPSF1-213ENST00000620219 CASP12Q6UXS9 341 aa14.83□□□□□ -0.03
CPSF1-213ENST00000620219 CARM1Q86X55 608 aa14.83□□□□□ -0.03
CPSF1-213ENST00000620219 PMEPA1Q969W9 287 aa14.83□□□□□ -0.03
CPSF1-213ENST00000620219 SMOC1Q9H4F8 434 aa14.83□□□□□ -0.03
CPSF1-213ENST00000620219 MAN2B2Q9Y2E5 1009 aa14.83□□□□□ -0.03
CPSF1-213ENST00000620219 CPSF4LA6NMK7 179 aaKnown RBP14.83□□□□□ -0.04
CPSF1-213ENST00000620219 SOX14O95416 240 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 CSF2P04141 144 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 ALDH3A2P51648 485 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 ZP2Q05996 745 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 C14orf28Q4W4Y0 310 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 ZNF730Q6ZMV8 503 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 AMDHD1Q96NU7 426 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 DENRO43583 198 aaKnown RBP14.83□□□□□ -0.04
CPSF1-213ENST00000620219 RETP07949 1114 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 ITPKBP27987 946 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 CTSKP43235 329 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 WNT3P56703 355 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 OCA2Q04671 838 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 LRIF1Q5T3J3 769 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 SVOPLQ8N434 492 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 GORASP2Q9H8Y8 452 aa14.83□□□□□ -0.04
CPSF1-213ENST00000620219 LIN28AQ9H9Z2 209 aaKnown RBP14.83□□□□□ -0.04
CPSF1-213ENST00000620219 AKAP7Q9P0M2 348 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-213ENST00000620219 HYKKA2RU49 373 aa14.82□□□□□ -0.04
CPSF1-213ENST00000620219 M0R3H8 397 aa14.82□□□□□ -0.04
CPSF1-213ENST00000620219 P2RX6O15547 441 aa14.82□□□□□ -0.04
CPSF1-213ENST00000620219 NME1P15531 152 aaKnown RBP14.82□□□□□ -0.04
CPSF1-213ENST00000620219 PEBP1P30086 187 aaKnown RBP14.82□□□□□ -0.04
CPSF1-213ENST00000620219 UGT2B15P54855 530 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms