RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 MATKP42679 507 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 PCP4P48539 62 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 CDC42P60953 191 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 PPIGQ13427 754 aaKnown RBP eCLIP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 GSG1Q2KHT4 349 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 AVPI1Q5T686 147 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 LYPD4Q6UWN0 246 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 MAMDC2Q7Z304 686 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 PLEKHH3Q7Z736 793 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 SERPINA12Q8IW75 414 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ZFP41Q8N8Y5 198 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ATF6BQ99941 703 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 TFB2MQ9H5Q4 396 aaKnown RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 C11orf16Q9NQ32 467 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ZNF302Q9NR11 478 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 CNOT2Q9NZN8 540 aaKnown RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ZMYM5Q9UJ78 669 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 RNF215Q9Y6U7 377 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 NUP214P35658 2090 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 CHD5Q8TDI0 1954 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 SHROOM3Q8TF72 1996 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 A0A1B0GWJ7 208 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 IFRD1O00458 451 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ARPC5O15511 151 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 CLN5O75503 358 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ELK1P19419 428 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 HLA-DPA1P20036 260 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 NFYAP23511 347 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ITPKAP23677 461 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 KDELR2P33947 212 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 CNR2P34972 360 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ARSDP51689 593 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 STX4Q12846 297 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 C1DQ13901 141 aaKnown RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ABRAXAS2Q15018 415 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 GUCA2BQ16661 112 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 SPIN4Q56A73 249 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 CRTC1Q6UUV9 634 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 METTL7BQ6UX53 244 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 GPR142Q7Z601 462 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 SERINC5Q86VE9 423 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 WDSUB1Q8N9V3 476 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 RXFP4Q8TDU9 374 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 RAB7BQ96AH8 199 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 FCRL1Q96LA6 429 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 DDX31Q9H8H2 851 aaKnown RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 AGO3Q9H9G7 860 aaKnown RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 UCK1Q9HA47 277 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 SLC6A20Q9NP91 592 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 NFKBIL1Q9UBC1 381 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 PCTPQ9UKL6 214 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 CHST2Q9Y4C5 530 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 DBX1A6NMT0 343 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 VEGFDO43915 354 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 SPDEFO95238 335 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 WISP3O95389 354 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 S1PR4O95977 384 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 TXNP10599 105 aaKnown RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ACPPP15309 386 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 SIM1P81133 766 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 HMGCS1Q01581 520 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 TLE2Q04725 743 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 FAM110CQ1W6H9 321 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 SGO1Q5FBB7 561 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ATAT1Q5SQI0 421 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 FUT10Q6P4F1 479 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 LRRN1Q6UXK5 716 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 IL20RBQ6UXL0 311 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 MACC1Q6ZN28 852 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 NUDT18Q6ZVK8 323 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 OR56A4Q8NGH8 313 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 SPPL2AQ8TCT8 520 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 PIGKQ92643 395 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 CACNG6Q9BXT2 260 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ARL6Q9H0F7 186 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 EPHA6Q9UF33 1036 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 AAR2Q9Y312 384 aaKnown RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 NPEPPSL1A6NEC2 478 aa11.94□□□□□ -0.5
CTCFL-218ENST00000608440 TERTO14746 1132 aaKnown RBP11.94□□□□□ -0.5
CTCFL-218ENST00000608440 ANKRD34CP0C6C1 535 aa11.94□□□□□ -0.5
CTCFL-218ENST00000608440 PTBP1P26599 531 aaKnown RBP eCLIP11.94□□□□□ -0.5
CTCFL-218ENST00000608440 RORAP35398 523 aa11.94□□□□□ -0.5
CTCFL-218ENST00000608440 AFF1P51825 1210 aaKnown RBP11.94□□□□□ -0.5
CTCFL-218ENST00000608440 CDH12P55289 794 aa11.94□□□□□ -0.5
CTCFL-218ENST00000608440 GK2Q14410 553 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-218ENST00000608440 SMCO1Q147U7 214 aa11.94□□□□□ -0.5
CTCFL-218ENST00000608440 TAF1CQ15572 869 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-218ENST00000608440 SSX2Q16385 188 aa11.94□□□□□ -0.5
CTCFL-218ENST00000608440 FAM109BQ6ICB4 259 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-218ENST00000608440 LGI4Q8N135 537 aa11.94□□□□□ -0.5
CTCFL-218ENST00000608440 EIF4E3Q8N5X7 224 aaKnown RBP11.94□□□□□ -0.5
CTCFL-218ENST00000608440 STAG3L4Q8TBR4 150 aa11.94□□□□□ -0.5
CTCFL-218ENST00000608440 PCYT2Q99447 389 aa11.94□□□□□ -0.5
CTCFL-218ENST00000608440 IMP3Q9NV31 184 aaKnown RBP11.94□□□□□ -0.5
CTCFL-218ENST00000608440 ABT1Q9ULW3 272 aaKnown RBP11.94□□□□□ -0.5
CTCFL-218ENST00000608440 NUBP2Q9Y5Y2 271 aa11.94□□□□□ -0.5
CTCFL-218ENST00000608440 PLSCR5A0PG75 271 aa11.94□□□□□ -0.5
CTCFL-218ENST00000608440 LRIT2A6NDA9 550 aa11.94□□□□□ -0.5
CTCFL-218ENST00000608440 PIP5K1CO60331 668 aa11.94□□□□□ -0.5
CTCFL-218ENST00000608440 MSCO60682 206 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms