RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	REG4	Q9BYZ8	158 aa		11.17	□□□□□ -0.62
NUP62-223	ENST00000601665	METTL7A	Q9H8H3	244 aa		11.17	□□□□□ -0.62
NUP62-223	ENST00000601665	SNX15	Q9NRS6	342 aa		11.17	□□□□□ -0.62
NUP62-223	ENST00000601665	MAPRE3	Q9UPY8	281 aa		11.17	□□□□□ -0.62
NUP62-223	ENST00000601665	MED12	Q93074	2177 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665		A0A087X1B8	175 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665		A0A1W2PNV4	684 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	OR6C76	A6NM76	312 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665		A8MV72	311 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	C16orf97	H3BN30	126 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	CD5L	O43866	347 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	TMCC2	O75069	709 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	CDH16	O75309	829 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	PAX1	P15863	534 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	ALOX15	P16050	662 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	TLX1	P31314	330 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	SOX18	P35713	384 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	UGT2B10	P36537	528 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	SSR2	P43308	183 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	EBP	Q15125	230 aa	Known RBP	11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	ANKRD22	Q5VYY1	191 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	OR2A2	Q6IF42	318 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	SBSN	Q6UWP8	590 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	PLXDC2	Q6UX71	529 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	RAD9B	Q6WBX8	426 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	ZNF550	Q7Z398	422 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	RIT1	Q92963	219 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	TMEM41A	Q96HV5	264 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	PELO	Q9BRX2	385 aa	Known RBP	11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	PHACTR1	Q9C0D0	580 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	RPF2	Q9H7B2	306 aa	Known RBP	11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	NT5DC2	Q9H857	520 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	PPAN	Q9NQ55	473 aa	Known RBP	11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	PRDM7	Q9NQW5	492 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	ZNF701	Q9NV72	531 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	ZKSCAN5	Q9Y2L8	839 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	WIF1	Q9Y5W5	379 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	CAPN6	Q9Y6Q1	641 aa		11.16	□□□□□ -0.62
NUP62-223	ENST00000601665	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.16	□□□□□ -0.62	6e-8	■□□□□ 10
NUP62-223	ENST00000601665	UQCRHL	A0A096LP55	91 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	NPEPPSL1	A6NEC2	478 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	RTCA	O00442	366 aa	Known RBP	11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	TNFSF13	O75888	250 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	CCDC175	P0C221	793 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	HIST1H1T	P22492	207 aa	Predicted RBP	11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	ATP5A1	P25705	553 aa	Known RBP	11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	PTPN6	P29350	595 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	IDUA	P35475	653 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	CASP3	P42574	277 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	GDF5	P43026	501 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	MAGEA6	P43360	314 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	PGGT1B	P53609	377 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	OCRL	Q01968	901 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	ETFDH	Q16134	617 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	HIST2H2AC	Q16777	129 aa	Predicted RBP	11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	PAGE2B	Q5JRK9	111 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	FNDC7	Q5VTL7	733 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	HIST2H2AA3	Q6FI13	130 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	ADNP2	Q6IQ32	1131 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	AAGAB	Q6PD74	315 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	ZNF704	Q6ZNC4	412 aa	Predicted RBP	11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	VN1R5	Q7Z5H4	357 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	TRIM42	Q8IWZ5	723 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	BBOF1	Q8ND07	529 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	RDH11	Q8TC12	318 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	TANK	Q92844	425 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	TRMT61A	Q96FX7	289 aa	Known RBP	11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	PGM2	Q96G03	612 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	VPS39	Q96JC1	886 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	UCN2	Q96RP3	112 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	MS4A12	Q9NXJ0	267 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	ELOVL5	Q9NYP7	299 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	FETUB	Q9UGM5	382 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	VWA7	Q9Y334	891 aa		11.15	□□□□□ -0.62
NUP62-223	ENST00000601665	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	NCF1B	A6NI72	391 aa	Predicted RBP	11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	NCF1C	A8MVU1	366 aa	Predicted RBP	11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	SH3BGRL	O75368	114 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	TBX6	O95947	436 aa	Predicted RBP	11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	FGG	P02679	453 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	AHSG	P02765	367 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	CRH	P06850	196 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	FAM157C	P0CG43	387 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	NCF1	P14598	390 aa	Predicted RBP	11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	PGAM1	P18669	254 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	GABRB3	P28472	473 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	PCYT1A	P49585	367 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	SLC37A1	P57057	533 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	RPS13	P62277	151 aa	Known RBP	11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	RPS4X	P62701	263 aa	Known RBP	11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	SIRPA	P78324	504 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	IGLV3-21	P80748	117 aa	Predicted RBP	11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	CRYM	Q14894	314 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	PPP1R3A	Q16821	1122 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	BEX5	Q5H9J7	111 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	FAM45BP	Q6NSW5	357 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	ZNF793	Q6ZN11	406 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms