RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SLAMF1Q13291 335 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 DOC2AQ14183 400 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 SETDB1Q15047 1291 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 EBPQ15125 230 aaKnown RBP8.21□□□□□ -1.1
SMG6-218ENST00000575454 TSNQ15631 228 aaKnown RBP8.21□□□□□ -1.1
SMG6-218ENST00000575454 PDK4Q16654 411 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 EIPR1Q53HC9 387 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 TIGD3Q6B0B8 471 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 OR4C11Q6IEV9 310 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 TTC27Q6P3X3 843 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 ZNF793Q6ZN11 406 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 UBE3DQ7Z6J8 389 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 GPR180Q86V85 440 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 TRIM58Q8NG06 486 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 OR1J4Q8NGS1 313 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 INTS12Q96CB8 462 aaKnown RBP8.21□□□□□ -1.1
SMG6-218ENST00000575454 CMTM7Q96FZ5 175 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 SLC39A3Q9BRY0 314 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 ERVK-6Q9BXR3 956 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 UBTD1Q9HAC8 227 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 POPDC3Q9HBV1 291 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 TEX10Q9NXF1 929 aaPredicted RBP8.21□□□□□ -1.1
SMG6-218ENST00000575454 WWOXQ9NZC7 414 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 ADGRE2Q9UHX3 823 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 PTBP2Q9UKA9 531 aaKnown RBP8.21□□□□□ -1.1
SMG6-218ENST00000575454 ADAM21Q9UKJ8 722 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 IKZF3Q9UKT9 509 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 ERVK-19Q9WJR5 959 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 NPFFR2Q9Y5X5 522 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 NCF1BA6NI72 391 aaPredicted RBP8.2□□□□□ -1.1
SMG6-218ENST00000575454 NCF1CA8MVU1 366 aaPredicted RBP8.2□□□□□ -1.1
SMG6-218ENST00000575454 HRKO00198 91 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 LRATO95237 230 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 RHOXF2BP0C7M4 288 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 SLC35E2BP0CK96 405 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 SLC35E2P0CK97 266 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 NCF1P14598 390 aaPredicted RBP8.2□□□□□ -1.1
SMG6-218ENST00000575454 PAX1P15863 534 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 NAGAP17050 411 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 KRT15P19012 456 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 CRYGSP22914 178 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 CPOXP36551 454 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 CASP3P42574 277 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 ARFIP1P53367 373 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 NAGLUP54802 743 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 FBXW4P57775 412 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 FOXF2Q12947 444 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 FRG1Q14331 258 aaKnown RBP8.2□□□□□ -1.1
SMG6-218ENST00000575454 TGFBIQ15582 683 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 KCTD19Q17RG1 926 aaPredicted RBP8.2□□□□□ -1.1
SMG6-218ENST00000575454 WIPI1Q5MNZ9 446 aaPredicted RBP8.2□□□□□ -1.1
SMG6-218ENST00000575454 RNASEH2BQ5TBB1 312 aaKnown RBP8.2□□□□□ -1.1
SMG6-218ENST00000575454 FNDC7Q5VTL7 733 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 KHDRBS2Q5VWX1 349 aaKnown RBP8.2□□□□□ -1.1
SMG6-218ENST00000575454 OR2A2Q6IF42 318 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 SULT1C3Q6IMI6 304 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 AAGABQ6PD74 315 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 PODNL1Q6PEZ8 512 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 CCDC137Q6PK04 289 aaKnown RBP8.2□□□□□ -1.1
SMG6-218ENST00000575454 ADGRE4PQ86SQ3 457 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 GPSM1Q86YR5 675 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 MEIOBQ8N635 442 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 SNX31Q8N9S9 440 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 C17orf47Q8NEP4 570 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 ZNF473Q8WTR7 871 aaKnown RBP8.2□□□□□ -1.1
SMG6-218ENST00000575454 TMEM158Q8WZ71 300 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 RGMAQ96B86 450 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 PIK3IP1Q96FE7 263 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 TUBA1CQ9BQE3 449 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 MED18Q9BUE0 208 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 MS4A8Q9BY19 250 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 CXorf56Q9H5V9 222 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 WDR41Q9HAD4 459 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 ELOVL5Q9NYP7 299 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 C6orf203Q9P0P8 240 aaPredicted RBP8.2□□□□□ -1.1
SMG6-218ENST00000575454 HCFC1P51610 2035 aa8.2□□□□□ -1.1
SMG6-218ENST00000575454 DEFB108AA8MXU0 73 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 GOLGA6L6A8MZA4 724 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 RTCAO00442 366 aaKnown RBP8.19□□□□□ -1.1
SMG6-218ENST00000575454 CBR3O75828 277 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 S100BP04271 92 aaPredicted RBP8.19□□□□□ -1.1
SMG6-218ENST00000575454 C8BP07358 591 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 PTPN6P29350 595 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 CXCR5P32302 372 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 CD79BP40259 229 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 PTH2RP49190 550 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 FNTAP49354 379 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 RAP1GDS1P52306 607 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 PGGT1BP53609 377 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 SLC12A2P55011 1212 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 ATP6V0D1P61421 351 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 RPS13P62277 151 aaKnown RBP8.19□□□□□ -1.1
SMG6-218ENST00000575454 TNFRSF17Q02223 184 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 SNTA1Q13424 505 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 FGFBP1Q14512 234 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 CYP1B1Q16678 543 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 C18orf21Q32NC0 220 aaPredicted RBP8.19□□□□□ -1.1
SMG6-218ENST00000575454 DCST1Q5T197 706 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 DEPDC1Q5TB30 811 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 C6orf163Q5TEZ5 329 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms