RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 GABRR3A8MPY1 467 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 ATXN7O15265 892 aaPredicted RBP15.13■□□□□ 0.01
PFN1-203ENST00000574872 PDPK1O15530 556 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 F10P00742 488 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 ATP1B1P05026 303 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 SSTR4P31391 388 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 GALNSP34059 522 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 SOX11P35716 441 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 IDH3AP50213 366 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 MRPS35P82673 323 aaKnown RBP15.13■□□□□ 0.01
PFN1-203ENST00000574872 SF3A3Q12874 501 aaKnown RBP eCLIP15.13■□□□□ 0.011e-14■□□□□ 11.3
PFN1-203ENST00000574872 PDE7AQ13946 482 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 LSM12Q3MHD2 195 aaKnown RBP15.13■□□□□ 0.01
PFN1-203ENST00000574872 CRB2Q5IJ48 1285 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 TCTN3Q6NUS6 607 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 ISLR2Q6UXK2 745 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 HSDL2Q6YN16 418 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 ASB18Q6ZVZ8 466 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 ACAD11Q709F0 780 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 R3HCC1LQ7Z5L2 792 aaKnown RBP15.13■□□□□ 0.01
PFN1-203ENST00000574872 SPATA19Q7Z5L4 167 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 LRRC34Q8IZ02 419 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 SAMD14Q8IZD0 417 aaPredicted RBP15.13■□□□□ 0.01
PFN1-203ENST00000574872 SLC5A8Q8N695 610 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 RFWD2Q8NHY2 731 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 SUN3Q8TAQ9 357 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 KAT2AQ92830 837 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 WBP1Q96G27 269 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 ART5Q96L15 291 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 NPAS2Q99743 824 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 CDCP1Q9H5V8 836 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 LIN28AQ9H9Z2 209 aaKnown RBP15.13■□□□□ 0.01
PFN1-203ENST00000574872 SLAMF7Q9NQ25 335 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 FGFR1OP2Q9NVK5 253 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 TAS2R7Q9NYW3 318 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 MAT2BQ9NZL9 334 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 DCTN4Q9UJW0 460 aa15.13■□□□□ 0.01
PFN1-203ENST00000574872 CNTRLQ7Z7A1 2325 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 CHD6Q8TD26 2715 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 SPTA1P02549 2419 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 FAM208BQ5VWN6 2430 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 MYO1GB0I1T2 1018 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 E9PBE3 544 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 POLR3GO15318 223 aaPredicted RBP15.12■□□□□ 0.01
PFN1-203ENST00000574872 KLHL41O60662 606 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 ZFAND5O76080 213 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 TGDSO95455 350 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 IGKV3-11P04433 115 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 LAMP1P11279 417 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 PCSK2P16519 638 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 PRPS1L1P21108 318 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 MPIP34949 423 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 GYS2P54840 703 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 CLDN8P56748 225 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 MGAT2Q10469 447 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 EXOSC7Q15024 291 aaKnown RBP15.12■□□□□ 0.01
PFN1-203ENST00000574872 CEBPEQ15744 281 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 MPEG1Q2M385 716 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 PRICKLE4Q2TBC4 344 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 COLEC12Q5KU26 742 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 ABHD17BQ5VST6 288 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 RNF111Q6ZNA4 994 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 C16orf47Q6ZP98 133 aaPredicted RBP15.12■□□□□ 0.01
PFN1-203ENST00000574872 C9orf40Q8IXQ3 194 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 FAM9CQ8IZT9 166 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 VWA5B2Q8N398 1253 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 SIMC1Q8NDZ2 872 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 CEP70Q8NHQ1 597 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 DPY30Q9C005 99 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 SLC25A18Q9H1K4 315 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 GLIPR2Q9H4G4 154 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 ANKRA2Q9H9E1 313 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 TCF7L2Q9NQB0 619 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 AIG1Q9NVV5 245 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 PLA2G3Q9NZ20 509 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 ATP6V1HQ9UI12 483 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 ZNF451Q9Y4E5 1061 aa15.12■□□□□ 0.01
PFN1-203ENST00000574872 C9JVG2 144 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 UBDO15205 165 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 TBX19O60806 448 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 CLPSP04118 112 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 SOX18P35713 384 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 RPL3P39023 403 aaKnown RBP15.11■□□□□ 0.01
PFN1-203ENST00000574872 CD97P48960 835 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 HSPB3Q12988 150 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 MFAP5Q13361 173 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 PGS1Q32NB8 556 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 TRMT12Q53H54 448 aaKnown RBP15.11■□□□□ 0.01
PFN1-203ENST00000574872 ZNF628Q5EBL2 1059 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 ACER2Q5QJU3 275 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 CPTPQ5TA50 214 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 H3F3CQ6NXT2 135 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 TMEM107Q6UX40 140 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 ZNF551Q7Z340 670 aaPredicted RBP15.11■□□□□ 0.01
PFN1-203ENST00000574872 RPS19BP1Q86WX3 136 aaKnown RBP15.11■□□□□ 0.01
PFN1-203ENST00000574872 RIMKLAQ8IXN7 391 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 BEST3Q8N1M1 668 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 SLC39A7Q92504 469 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 MTERF3Q96E29 417 aa15.11■□□□□ 0.01
PFN1-203ENST00000574872 ZNF764Q96H86 408 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms