RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 WASHC1A8K0Z3 465 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 VEGFDO43915 354 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 PLGP00747 810 aaPredicted RBP13.34□□□□□ -0.27
VTI1B-204ENST00000554659 ASGR2P07307 311 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 S1PR1P21453 382 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 KCTD18Q6PI47 426 aaPredicted RBP13.34□□□□□ -0.27
VTI1B-204ENST00000554659 WASH2PQ6VEQ5 465 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 DPY19L3Q6ZPD9 716 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 CYP4V2Q6ZWL3 525 aaPredicted RBP13.34□□□□□ -0.27
VTI1B-204ENST00000554659 PAPD5Q8NDF8 572 aaKnown RBP13.34□□□□□ -0.27
VTI1B-204ENST00000554659 OR56A3Q8NH54 315 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 THAP4Q8WY91 577 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 RAB7BQ96AH8 199 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 TMEM125Q96AQ2 219 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 ZNF689Q96CS4 500 aaPredicted RBP13.34□□□□□ -0.27
VTI1B-204ENST00000554659 SAV1Q9H4B6 383 aaPredicted RBP13.34□□□□□ -0.27
VTI1B-204ENST00000554659 B3GAT2Q9NPZ5 323 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 ARPC4-TTLL3A0A0A6YYG9 625 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 TVP23AA6NH52 213 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 SOX30O94993 753 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 NDUFV2P19404 249 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 CTBP2P56545 445 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 HYAL2Q12891 473 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.34□□□□□ -0.27
VTI1B-204ENST00000554659 NXPE4Q6UWF7 544 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 UBQLNLQ8IYU4 475 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 ACBD7Q8N6N7 88 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 SMARCD2Q92925 531 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 ZNF597Q96LX8 424 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 PCDHB16Q9NRJ7 776 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 PRODH2Q9UF12 536 aa13.34□□□□□ -0.27
VTI1B-204ENST00000554659 KHNYNO15037 678 aaKnown RBP13.33□□□□□ -0.27
VTI1B-204ENST00000554659 MSL3P1P0C860 447 aa13.33□□□□□ -0.27
VTI1B-204ENST00000554659 CFL1P23528 166 aaKnown RBP13.33□□□□□ -0.27
VTI1B-204ENST00000554659 INHBCP55103 352 aa13.33□□□□□ -0.27
VTI1B-204ENST00000554659 WNT7BP56706 349 aa13.33□□□□□ -0.27
VTI1B-204ENST00000554659 NFE2L1Q14494 772 aa13.33□□□□□ -0.27
VTI1B-204ENST00000554659 PLEKHN1Q494U1 663 aaPredicted RBP13.33□□□□□ -0.27
VTI1B-204ENST00000554659 ERN2Q76MJ5 926 aaKnown RBP13.33□□□□□ -0.27
VTI1B-204ENST00000554659 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.33□□□□□ -0.27
VTI1B-204ENST00000554659 TP53INP2Q8IXH6 220 aa13.33□□□□□ -0.27
VTI1B-204ENST00000554659 DTX3Q8N9I9 347 aa13.33□□□□□ -0.27
VTI1B-204ENST00000554659 GPR150Q8NGU9 434 aa13.33□□□□□ -0.27
VTI1B-204ENST00000554659 HUS1BQ8NHY5 278 aa13.33□□□□□ -0.27
VTI1B-204ENST00000554659 HMGB4Q8WW32 186 aa13.33□□□□□ -0.27
VTI1B-204ENST00000554659 SLC2A11Q9BYW1 496 aa13.33□□□□□ -0.27
VTI1B-204ENST00000554659 EIF5A2Q9GZV4 153 aaKnown RBP13.33□□□□□ -0.27
VTI1B-204ENST00000554659 SYT4Q9H2B2 425 aa13.33□□□□□ -0.27
VTI1B-204ENST00000554659 GALTP07902 379 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 MANEALQ5VSG8 457 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 GDPD1Q8N9F7 314 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 OR52P1PQ8NH57 321 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 TCEAL3Q969E4 200 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 RAD9AQ99638 391 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 POTEKPQ9BYX7 375 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 KLRF1Q9NZS2 232 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 COPZ2Q9P299 210 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 S100PP25815 95 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 DCTP40126 519 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 GK3PQ14409 553 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 ASPGQ86U10 573 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 KLBQ86Z14 1044 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 OR4K17Q8NGC6 315 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 IGSF21Q96ID5 467 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 CMKLR1Q99788 373 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 TMEM14AQ9Y6G1 99 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 RNF13O43567 381 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 MITFO75030 526 aaPredicted RBP13.33□□□□□ -0.28
VTI1B-204ENST00000554659 OXTRP30559 389 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 HTR6P50406 440 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 GPR143P51810 404 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 SNTB2Q13425 540 aaKnown RBP13.33□□□□□ -0.28
VTI1B-204ENST00000554659 GPM6BQ13491 265 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 NTRK2Q16620 822 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 TMEM35AQ53FP2 167 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 DCDC5Q6ZRR9 648 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 DTWD1Q8N5C7 304 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 TMIGD2Q96BF3 282 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 SLC29A1Q99808 456 aa13.33□□□□□ -0.28
VTI1B-204ENST00000554659 RPH3AQ9Y2J0 694 aaPredicted RBP13.33□□□□□ -0.28
VTI1B-204ENST00000554659 SORBS2O94875 1100 aaKnown RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 AK1P00568 194 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 PIM1P11309 404 aaPredicted RBP13.32□□□□□ -0.28
VTI1B-204ENST00000554659 PYCR1P32322 319 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 SLAMF1Q13291 335 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 DLK2Q6UY11 383 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 GDPGP1Q6ZNW5 385 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 COMTD1Q86VU5 262 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 MS4A15Q8N5U1 240 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 SLC5A8Q8N695 610 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 TSTD1Q8NFU3 115 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 NETO1Q8TDF5 533 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 TFAP2CQ92754 450 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 OR4K3Q96R72 315 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 SLC6A7Q99884 636 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ENY2Q9NPA8 101 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 MGAT4CQ9UBM8 478 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ACSL6Q9UKU0 697 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 ZNF840PA6NDX5 716 aa13.32□□□□□ -0.28
VTI1B-204ENST00000554659 CD8B2A6NJW9 211 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms